Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_13335 and AO353_13340 are separated by 364 nucleotidesAO353_13340 and AO353_13345 are separated by 185 nucleotidesAO353_13345 and AO353_13350 are separated by 2 nucleotidesAO353_13350 and AO353_13355 overlap by 4 nucleotides AO353_13335: AO353_13335 - FAD-dependent oxidoreductase, at 2,956,374 to 2,957,657 _13335 AO353_13340: AO353_13340 - amino acid ABC transporter substrate-binding protein, at 2,958,022 to 2,959,155 _13340 AO353_13345: AO353_13345 - branched-chain amino acid transporter permease subunit LivH, at 2,959,341 to 2,960,255 _13345 AO353_13350: AO353_13350 - branched-chain amino acid ABC transporter permease, at 2,960,258 to 2,961,556 _13350 AO353_13355: AO353_13355 - ABC transporter ATP-binding protein, at 2,961,553 to 2,962,428 _13355
Group Condition AO353_13335 AO353_13340 AO353_13345 AO353_13350 AO353_13355
carbon source L-Isoleucine (C) -0.3 -1.4 -1.4 -1.6 -1.5
nitrogen source Gly-Glu (N) -0.1 -0.9 -1.1 -1.0 -1.0
carbon source L-Leucine (C) -0.1 -1.2 -0.8 -1.0 -0.9
carbon source L-Proline (C) -0.3 -0.7 -0.9 -1.1 -0.6
carbon source L-Proline (C) +0.0 -0.8 -0.8 -0.9 -0.9
nitrogen source L-Phenylalanine (N) -0.1 -0.8 -0.9 -0.6 -0.3
stress Doxycycline hyclate 0.0006 mg/ml -0.8 -0.5 -0.0 +0.2 -0.3
nitrogen source D-Alanine (N) -0.1 -0.2 -0.4 -0.1 -0.3
stress Lomefloxacin 0.001 mM -0.3 +0.1 -0.0 +0.1 -0.7
carbon source L-Asparagine (C) +0.0 -0.3 -0.2 -0.3 -0.1
carbon source D-Alanine (C) -0.3 -0.1 -0.2 -0.1 +0.1
carbon source L-Citrulline +0.0 -0.1 -0.1 +0.0 -0.5
pH Minimal media pH8 -0.1 -0.0 +0.1 +0.0 -0.5
stress Spectinomycin 0.2 mg/ml +0.1 -0.1 +0.0 -0.1 -0.4
stress copper (II) chloride 2.5 mM -0.1 -0.2 +0.2 +0.1 -0.3
stress Cholin acetate 10 mM -0.1 +0.1 -0.2 +0.1 -0.3
carbon source D-Glucose -0.3 +0.2 +0.0 -0.2 +0.1
nitrogen source Parabanic Acid (N) -0.4 -0.2 +0.1 +0.1 +0.2
carbon source propionate (C) +0.1 -0.2 +0.1 +0.2 -0.3
stress Cisplatin 0.006 mg/ml +0.2 -0.1 +0.0 -0.4 +0.3
nitrogen source L-Glutamine (N) -0.1 -0.1 +0.2 -0.2 +0.3
carbon source Glycerol (C) -0.1 +0.2 -0.0 -0.1 +0.3
carbon source L-Citrulline +0.4 -0.0 +0.2 -0.1 +0.1
motility outer cut, LB soft agar motility assay -0.2 +0.3 +0.1 +0.3 +0.1
carbon source L-Citrulline +0.3 +0.2 -0.0 -0.1 +0.3
stress sodium fluoride 6.25 mM +0.2 +0.2 +0.1 -0.1 +0.2
pH Minimal media pH9 +0.0 -0.0 -0.0 +0.3 +0.6
carbon source L-Serine (C) +0.3 +0.2 +0.2 +0.3 +0.1
carbon source L-Ornithine +0.2 +0.5 +0.2 +0.1 -0.0
carbon source L-Ornithine +0.3 +0.5 +0.2 +0.2 +0.4
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