Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_12890 and AO353_12895 are separated by 103 nucleotidesAO353_12895 and AO353_12900 overlap by 1 nucleotidesAO353_12900 and AO353_12905 overlap by 25 nucleotidesAO353_12905 and AO353_12910 are separated by 419 nucleotides AO353_12890: AO353_12890 - heptose kinase, at 2,854,094 to 2,854,900 _12890 AO353_12895: AO353_12895 - lipopolysaccharide kinase, at 2,855,004 to 2,855,756 _12895 AO353_12900: AO353_12900 - serine/threonine protein kinase, at 2,855,756 to 2,857,195 _12900 AO353_12905: AO353_12905 - hypothetical protein, at 2,857,171 to 2,857,470 _12905 AO353_12910: AO353_12910 - hypothetical protein, at 2,857,890 to 2,858,261 _12910
Group Condition AO353_12890 AO353_12895 AO353_12900 AO353_12905 AO353_12910
stress Cisplatin 0.006 mg/ml N.D. -0.6 N.D. N.D. -0.7
carbon source propionate (C) N.D. -0.5 N.D. N.D. -0.7
stress Thallium(I) acetate 0.008 mg/ml N.D. -0.6 N.D. N.D. -0.5
carbon source L-Proline (C) N.D. -0.3 N.D. N.D. -0.8
stress A22 0.002 mg/ml N.D. -0.2 N.D. N.D. -0.9
stress Tetracycline 0.0016 mg/ml N.D. -0.5 N.D. N.D. -0.6
stress Rifampicin 0.005 mg/ml N.D. -0.5 N.D. N.D. -0.4
lb LB N.D. -0.7 N.D. N.D. -0.2
stress Chlorite 0.16 mM N.D. -0.6 N.D. N.D. -0.3
stress Fusidic 0.125 mg/ml N.D. -0.9 N.D. N.D. +0.0
carbon source L-Ornithine N.D. -0.5 N.D. N.D. -0.3
carbon source L-Citrulline N.D. -0.4 N.D. N.D. -0.4
radiation Ionizing radiation, 126.196 Gy, N.D. -0.4 N.D. N.D. -0.5
carbon source D-Glucose N.D. +0.2 N.D. N.D. -0.7
carbon source D-Glucose N.D. +0.4 N.D. N.D. -0.6
carbon source pyruvate (C) N.D. +0.6 N.D. N.D. -0.4
pH Minimal media pH9 N.D. +0.7 N.D. N.D. -0.4
carbon source L-Citrulline N.D. +0.9 N.D. N.D. -0.5
carbon source L-Serine (C) N.D. +0.8 N.D. N.D. -0.2
carbon source acetate (C) N.D. +0.8 N.D. N.D. -0.1
denitrifying Nitrate reduction, replicate B N.D. +0.8 N.D. N.D. -0.1
anaerobic Anaerobic, acetate donor; nitrate and iron N.D. +1.0 N.D. N.D. -0.2
denitrifying Nitrate reduction, replicate C N.D. +1.1 N.D. N.D. -0.2
stress perchlorate 75 mM N.D. +0.9 N.D. N.D. +0.1
pH Minimal media pH7 N.D. +0.3 N.D. N.D. +0.7
survival 4C survival; 360 hrs N.D. +0.7 N.D. N.D. +0.4
stress nitrate 200 mM N.D. +0.8 N.D. N.D. +0.3
stress Sisomicin 0.008 mg/ml N.D. +1.3 N.D. N.D. +0.1
survival 4C survival; 672 hrs N.D. +1.1 N.D. N.D. +0.6
carbon source acetate (C) N.D. +1.4 N.D. N.D. +0.4
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