Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_12835 and AO353_12840 are separated by 252 nucleotidesAO353_12840 and AO353_12845 are separated by 152 nucleotidesAO353_12845 and AO353_12850 are separated by 77 nucleotidesAO353_12850 and AO353_12855 are separated by 234 nucleotides AO353_12835: AO353_12835 - hypothetical protein, at 2,836,080 to 2,836,436 _12835 AO353_12840: AO353_12840 - lactate dehydrogenase, at 2,836,689 to 2,837,525 _12840 AO353_12845: AO353_12845 - peptide methionine sulfoxide reductase, at 2,837,678 to 2,838,325 _12845 AO353_12850: AO353_12850 - diguanylate cyclase, at 2,838,403 to 2,841,096 _12850 AO353_12855: AO353_12855 - phosphodiesterase, at 2,841,331 to 2,842,725 _12855
Group Condition AO353_12835 AO353_12840 AO353_12845 AO353_12850 AO353_12855
motility outer cut, LB soft agar motility assay -0.8 -0.9 -0.3 -1.6 +0.4
motility outer cut, LB soft agar motility assay -0.3 +0.2 -0.7 -2.3 +0.3
motility outer cut, LB soft agar motility assay +1.4 -0.2 -1.1 -2.4 +0.0
carbon source D-Glucose -1.0 -0.0 -1.1 +0.1 +0.2
pH Minimal media pH9 -1.1 -0.6 +0.2 +0.0 +0.2
carbon source L-Ornithine -0.5 -0.1 -0.7 -0.0 +0.1
stress A22 0.002 mg/ml -1.0 +0.0 -0.2 -0.1 -0.1
nitrogen source Gly-DL-Asp (N) -0.6 -0.3 -0.2 -0.2 +0.1
carbon source D-Glucose -1.2 -0.2 -0.0 +0.1 +0.3
carbon source L-Ornithine -0.8 +0.6 -0.5 -0.2 +0.1
stress perchlorate 75 mM +0.3 -0.7 -0.3 -0.3 +0.1
carbon source L-Ornithine -0.3 +0.3 -0.8 -0.0 +0.3
stress Sisomicin 0.008 mg/ml -0.5 +0.3 -0.3 -0.1 +0.3
carbon source L-Citrulline +0.2 +0.3 -0.5 +0.0 +0.2
stress Gentamicin 0.006 mg/ml -0.5 +0.4 +0.3 +0.1 +0.1
stress Cisplatin 0.006 mg/ml -0.9 +0.5 +0.4 +0.4 +0.3
stress Cisplatin 0.006 mg/ml -0.4 +0.2 +0.0 +0.4 +0.3
lb LB -0.3 -0.1 +0.5 +0.5 +0.0
stress acetate 68 mM +0.1 -0.2 +0.5 +0.7 +0.0
stress acetate 17 mM -0.4 +0.0 +0.6 +0.9 -0.0
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.4 -0.1 +0.8 +1.1 -0.1
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.1 +0.0 +0.4 +0.7 +0.3
stress Tetracycline 0.0016 mg/ml +0.8 +0.3 -0.1 +0.2 +0.3
stress 1-ethyl-3-methylimidazolium acetate 15 mM +0.1 -0.3 +0.6 +1.1 -0.0
stress Cholin acetate 38 mM +0.3 -0.2 +0.7 +1.2 -0.0
stress Lomefloxacin 0.001 mM +0.6 +0.8 +0.3 +0.2 +0.1
stress acetate 34 mM -0.0 +0.0 +0.7 +1.1 +0.1
stress Cholin acetate 10 mM -0.0 +0.0 +0.7 +1.1 +0.1
stress Cholin acetate 19 mM +0.4 -0.2 +1.2 +1.2 -0.0
survival 4C survival; 672 hrs +0.2 +0.0 +1.6 +1.3 +0.1
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