Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_12630 and AO353_12635 overlap by 4 nucleotidesAO353_12635 and AO353_12640 overlap by 14 nucleotidesAO353_12640 and AO353_12645 overlap by 4 nucleotidesAO353_12645 and AO353_12650 overlap by 17 nucleotides AO353_12630: AO353_12630 - methyltransferase, at 2,780,170 to 2,780,910 _12630 AO353_12635: AO353_12635 - FAD-dependent oxidoreductase, at 2,780,907 to 2,782,154 _12635 AO353_12640: AO353_12640 - sodium:proton antiporter, at 2,782,141 to 2,783,301 _12640 AO353_12645: AO353_12645 - hypothetical protein, at 2,783,298 to 2,785,637 _12645 AO353_12650: AO353_12650 - hypothetical protein, at 2,785,621 to 2,786,187 _12650
Group Condition AO353_12630 AO353_12635 AO353_12640 AO353_12645 AO353_12650
motility outer cut, LB soft agar motility assay -0.5 -0.8 -0.3 +0.1 -4.4
anaerobic Anaerobic, acetate donor; nitrate and iron -0.2 +0.2 -0.6 -0.3 -3.9
stress Cisplatin 0.006 mg/ml -0.1 -0.7 -0.2 -0.3 -2.4
stress Sisomicin 0.008 mg/ml +0.2 -0.6 +0.0 -0.7 -2.2
stress copper (II) chloride 2.5 mM +0.2 +0.4 -0.0 -0.6 -2.6
stress Polymyxin B sulfate 4 mg/ml -0.2 -0.1 +0.0 -0.3 -2.0
carbon source propionate (C) +0.1 +0.1 -0.0 -0.1 -2.6
denitrifying Nitrate reduction, replicate B -0.6 +0.0 +0.0 +0.0 -1.8
carbon source Tween 20 (C) -0.0 -0.4 -0.2 -0.1 -1.6
carbon source L-Ornithine -0.2 -0.1 +0.1 -0.3 -1.6
carbon source L-Citrulline -0.8 -0.1 -0.3 -0.4 -0.5
stress Spectinomycin 0.1 mg/ml -0.5 +0.2 -0.1 -0.4 -1.3
stress 1-ethyl-3-methylimidazolium acetate 30 mM -0.0 +0.4 -0.1 -0.2 -2.0
carbon source propionate (C) +0.1 -0.6 -0.2 +0.1 -1.3
stress sodium fluoride 6.25 mM +0.2 +0.2 -0.0 +0.1 -2.1
pH Minimal media pH6 -0.3 +0.2 -0.2 +0.0 -1.5
pH Minimal media pH9 +0.5 +0.3 +0.1 +0.1 -2.6
pH Minimal media pH6 +0.1 -0.3 +0.0 +0.1 -1.5
carbon source butyrate (C) -0.3 +0.3 -0.1 -0.0 -1.4
motility outer cut, LB soft agar motility assay -0.5 +0.3 -0.1 +0.5 -1.4
stress Cobalt chloride 0.16 mM -0.2 +0.3 +0.2 -0.3 -1.2
stress Nalidixic 0.004 mg/ml +0.3 -0.2 +0.2 -0.0 -1.4
stress Vanillin 1.25 mM +0.4 +0.1 +0.1 -0.0 -1.6
stress Spectinomycin 0.15 mg/ml +0.1 +0.4 +0.0 -0.6 -1.0
stress Paraquat dichloride 0.032 mg/mL -0.1 +0.5 +0.4 -0.4 -1.4
carbon source acetate (C) +0.1 +0.5 -0.2 -0.1 -1.3
stress Doxycycline hyclate 0.0006 mg/ml -0.5 -0.1 +0.3 +0.2 +1.2
carbon source L-Citrulline -0.7 +0.8 +0.1 +0.2 +1.1
stress Lomefloxacin 0.001 mM -0.1 +0.5 +0.3 +0.2 +1.1
carbon source D-Glucose +0.5 +0.5 +0.3 -0.3 +1.1
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