Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_12575 and AO353_12580 overlap by 4 nucleotidesAO353_12580 and AO353_12585 overlap by 4 nucleotidesAO353_12585 and AO353_12590 overlap by 4 nucleotidesAO353_12590 and AO353_12595 are separated by 10 nucleotides AO353_12575: AO353_12575 - type II secretion system protein GspJ, at 2,770,671 to 2,771,216 _12575 AO353_12580: AO353_12580 - type II secretory protein PulK, at 2,771,213 to 2,772,067 _12580 AO353_12585: AO353_12585 - hypothetical protein, at 2,772,064 to 2,773,161 _12585 AO353_12590: AO353_12590 - hypothetical protein, at 2,773,158 to 2,773,625 _12590 AO353_12595: AO353_12595 - hypothetical protein, at 2,773,636 to 2,774,913 _12595
Group Condition AO353_12575 AO353_12580 AO353_12585 AO353_12590 AO353_12595
stress Cisplatin 0.006 mg/ml +0.6 -3.2 -0.1 -0.6 -0.0
stress Nickel (II) chloride 0.625 mM +0.3 -2.5 -0.1 -0.3 -0.4
carbon source L-Valine (C) -2.2 +0.1 -0.1 -0.1 -0.1
stress methylglyoxal 0.009 vol% +0.0 -2.9 +0.2 +0.4 +0.0
anaerobic Anaerobic, acetate donor; nitrate and iron -0.9 +1.3 -0.8 -1.7 -0.1
stress Tetracycline 0.0016 mg/ml -0.3 -0.2 -0.5 -1.0 -0.3
nitrogen source Gly-DL-Asp (N) -1.2 -0.4 -0.4 +0.1 +0.2
motility outer cut, LB soft agar motility assay -1.3 -0.8 -0.0 +1.0 +0.1
denitrifying Nitrate reduction, replicate B +0.4 -1.0 -0.3 +0.0 -0.1
nitrogen source L-Threonine (N) -0.4 -1.0 +0.6 -0.2 +0.1
stress nitrate 200 mM -0.8 +0.8 -0.6 -0.1 -0.1
stress Cisplatin 0.006 mg/ml -0.3 +1.3 -0.4 -1.1 -0.1
carbon source D-Alanine (C) +0.5 +0.5 -0.3 -1.1 +0.1
carbon source D-Glucose +0.6 -1.0 +0.3 -0.0 -0.0
stress Benzalkonium Chloride 0.012 mg/ml +0.3 -0.8 -0.2 +0.7 -0.1
motility outer cut, LB soft agar motility assay -0.6 -0.1 +0.6 -0.2 +0.5
motility outer cut, LB soft agar motility assay -0.6 +1.0 +0.3 -0.4 -0.1
carbon source L-Citrulline +0.1 +0.8 +0.4 -1.2 +0.2
stress Doxycycline hyclate 0.0006 mg/ml -1.4 +1.0 +0.5 +0.5 -0.1
stress Gentamicin 0.006 mg/ml -0.6 +1.0 +0.1 -0.1 +0.1
pH Minimal media pH9 -0.9 +1.4 -0.4 +0.4 +0.3
carbon source L-Citrulline -0.6 +0.9 +0.5 -0.3 +0.3
denitrifying Nitrate reduction, replicate C +1.1 +0.1 +0.3 -0.3 -0.3
carbon source L-Aspartic Acid (C) -0.0 +1.7 -0.5 -0.3 +0.1
carbon source L-Ornithine -0.3 +1.1 +0.2 +0.1 +0.2
carbon source Trisodium citrate (C) +0.6 +1.0 -0.1 -0.2 +0.2
carbon source acetate (C) +0.1 +1.0 -0.2 +0.6 +0.2
stress Paraquat dichloride 0.032 mg/mL +0.1 +0.8 -0.2 +0.5 +0.6
carbon source D-Ribose (C) +0.3 +0.6 -0.0 +0.6 +0.4
carbon source Tween 20 (C) +0.6 +0.8 -0.1 +0.4 +0.1
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