Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_11995 and AO353_12000 are separated by 13 nucleotidesAO353_12000 and AO353_12005 are separated by 555 nucleotidesAO353_12005 and AO353_12010 are separated by 69 nucleotidesAO353_12010 and AO353_12015 overlap by 1 nucleotides AO353_11995: AO353_11995 - amino acid ABC transporter, at 2,640,630 to 2,641,385 _11995 AO353_12000: AO353_12000 - amino acid transporter, at 2,641,399 to 2,642,172 _12000 AO353_12005: AO353_12005 - GABA permease, at 2,642,728 to 2,644,119 _12005 AO353_12010: AO353_12010 - plasmid maintenance protein, at 2,644,189 to 2,644,596 _12010 AO353_12015: AO353_12015 - antitoxin, at 2,644,596 to 2,644,826 _12015
Group Condition AO353_11995 AO353_12000 AO353_12005 AO353_12010 AO353_12015
stress Tetracycline 0.0016 mg/ml -0.0 +0.0 -0.0 -0.3 -2.2
nitrogen source Gly-Glu (N) +0.0 -0.1 -0.1 -0.1 -2.0
nitrogen source Parabanic Acid (N) +0.1 +0.2 -0.2 +0.1 -2.4
carbon source L-Ornithine +0.2 +0.3 -0.0 -0.6 -2.1
carbon source acetate (C) +0.2 -0.1 -0.4 -0.4 -1.5
stress Spectinomycin 0.2 mg/ml +0.1 -0.1 -0.0 -0.1 -1.9
carbon source L-Isoleucine (C) -0.2 -0.1 -0.3 -0.1 -1.3
nitrogen source L-Arginine (N) -0.3 -0.6 +0.2 +0.0 -1.2
nitrogen source L-Threonine (N) +0.1 -0.0 +0.0 +0.1 -2.1
stress Doxycycline hyclate 0.0006 mg/ml +0.1 -0.2 -0.5 -0.0 -1.4
stress Thallium(I) acetate 0.016 mg/ml -0.4 -0.5 +0.1 -0.3 -0.7
carbon source L-Ornithine +0.1 -0.2 +0.1 -0.3 -1.4
nitrogen source L-Threonine (N) +0.2 +0.2 +0.1 -0.0 -2.0
stress Lomefloxacin 0.001 mM -0.1 -0.0 +0.0 +0.1 -1.4
carbon source L-Arginine (C) +0.3 -0.3 -0.0 -0.0 -1.4
nitrogen source L-Arginine (N) -0.3 -0.4 +0.1 -0.0 -0.8
carbon source Ethanol (C) +0.0 -0.0 +0.1 +0.1 -1.5
pH Minimal media pH7 +0.1 -0.2 +0.1 +0.0 -1.4
carbon source L-Ornithine +0.3 +0.3 +0.1 -0.0 -2.1
stress Sisomicin 0.008 mg/ml +0.2 -0.3 +0.1 +0.3 -1.6
carbon source D-Alanine (C) +0.3 +0.2 -0.8 -0.2 -0.7
survival 4C survival; 360 hrs +0.4 -0.1 -0.1 +0.1 -1.5
stress Cisplatin 0.006 mg/ml -0.4 +0.2 +0.1 -0.1 -0.8
carbon source L-Valine (C) +0.2 +0.4 -0.2 -0.5 -0.6
carbon source propionate (C) +0.2 +0.4 -0.1 +0.0 -1.1
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.2 -0.2 -0.1 +0.4 -0.8
stress methylglyoxal 0.009 vol% +0.4 +0.2 -0.2 -0.3 +0.8
nitrogen source D-Alanine (N) +0.0 +0.6 -0.3 -0.1 +0.9
carbon source L-Citrulline +0.0 +0.1 -0.1 +0.3 +1.4
anaerobic Anaerobic, acetate donor; nitrate and iron +0.2 -0.1 -0.0 +0.7 +1.6
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