Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_11915 and AO353_11920 are separated by 247 nucleotidesAO353_11920 and AO353_11925 are separated by 211 nucleotidesAO353_11925 and AO353_11930 are separated by 25 nucleotidesAO353_11930 and AO353_11935 are separated by 236 nucleotides AO353_11915: AO353_11915 - agmatine deiminase, at 2,628,923 to 2,630,029 _11915 AO353_11920: AO353_11920 - hypothetical protein, at 2,630,277 to 2,630,477 _11920 AO353_11925: AO353_11925 - protein-disulfide isomerase, at 2,630,689 to 2,631,384 _11925 AO353_11930: AO353_11930 - ketosteroid isomerase, at 2,631,410 to 2,631,805 _11930 AO353_11935: AO353_11935 - hypothetical protein, at 2,632,042 to 2,633,328 _11935
Group Condition AO353_11915 AO353_11920 AO353_11925 AO353_11930 AO353_11935
stress Cisplatin 0.006 mg/ml -1.3 -2.1 +0.3 -0.1 -0.2
stress Cobalt chloride 0.32 mM -2.4 -0.6 -0.0 +0.1 -0.2
carbon source L-Alanine (C) -1.1 -2.6 +0.4 +0.2 -0.1
anaerobic Anaerobic, acetate donor; nitrate and iron -0.1 -3.0 -0.4 +0.3 +0.3
carbon source D-Glucose -1.1 -0.2 +0.1 -1.1 -0.6
stress Paraquat dichloride 0.032 mg/mL -2.6 +0.4 -0.0 -0.2 -0.4
carbon source L-Valine (C) -1.8 -0.3 +0.0 -0.2 -0.4
stress Thallium(I) acetate 0.016 mg/ml -0.6 -1.2 -0.3 -0.1 -0.5
stress Cobalt chloride 0.32 mM -2.4 -0.2 +0.2 +0.0 -0.3
carbon source L-Arginine (C) -1.9 -0.2 -0.0 -0.1 -0.4
carbon source L-Arginine (C) -1.9 -0.1 -0.1 -0.1 -0.3
stress methylglyoxal 0.009 vol% -2.1 -0.3 +0.0 -0.2 -0.1
stress Doxycycline hyclate 0.0002 mg/ml -0.6 -0.8 +0.2 -0.2 -1.0
carbon source acetate (C) -2.1 -0.2 +0.1 +0.1 -0.4
carbon source acetate (C) -0.9 -0.9 +0.1 +0.1 -0.4
motility outer cut, LB soft agar motility assay +0.6 -2.1 +0.0 -0.3 -0.1
motility outer cut, LB soft agar motility assay +0.7 -1.7 -0.3 -0.1 -0.5
stress Doxycycline hyclate 0.0006 mg/ml -1.4 +0.8 -0.3 -0.4 -0.7
stress 1-ethyl-3-methylimidazolium acetate 30 mM -1.0 +0.4 -0.6 -0.0 -0.3
carbon source L-Leucine (C) -1.5 +0.6 +0.0 +0.1 -0.3
carbon source L-Ornithine +1.7 -2.1 +0.1 -0.1 -0.5
stress Cisplatin 0.006 mg/ml -2.2 +0.2 +0.7 +0.5 -0.0
carbon source L-Citrulline -0.7 +1.3 -0.3 -0.2 -0.5
denitrifying Nitrate reduction, replicate B +1.1 -1.8 +0.4 -0.2 +0.4
pH Minimal media pH9 -1.3 +1.5 -0.2 +0.1 +0.0
pH Minimal media pH9 -1.1 +1.4 +0.1 -0.0 +0.0
carbon source L-Ornithine +1.4 +0.3 +0.5 -0.1 -0.6
carbon source L-Ornithine +2.4 -0.2 +0.1 -0.0 -0.7
denitrifying Nitrate reduction, replicate C +1.2 -0.2 +0.1 +0.4 +0.4
carbon source L-Ornithine +2.4 +0.8 +0.1 -0.1 -0.6
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