Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_11680 and AO353_11685 are separated by 194 nucleotidesAO353_11685 and AO353_11690 are separated by 342 nucleotidesAO353_11690 and AO353_11695 are separated by 16 nucleotidesAO353_11695 and AO353_11705 are separated by 865 nucleotides AO353_11680: AO353_11680 - cysteine desulfhydrase, at 2,578,305 to 2,579,297 _11680 AO353_11685: AO353_11685 - serine acetyltransferase, at 2,579,492 to 2,580,418 _11685 AO353_11690: AO353_11690 - choline transporter, at 2,580,761 to 2,582,764 _11690 AO353_11695: AO353_11695 - hypothetical protein, at 2,582,781 to 2,583,038 _11695 AO353_11705: AO353_11705 - L-glyceraldehyde 3-phosphate reductase, at 2,583,904 to 2,584,941 _11705
Group Condition AO353_11680 AO353_11685 AO353_11690 AO353_11695 AO353_11705
carbon source L-Valine (C) +0.2 -2.5 +0.1 +0.5 -0.0
stress Rifampicin 0.005 mg/ml -0.3 +0.2 -0.1 -1.4 -0.1
stress methylglyoxal 0.009 vol% -0.4 -0.1 -0.0 -1.2 +0.2
stress copper (II) chloride 2.5 mM -0.3 +0.0 -0.2 -0.9 +0.0
motility outer cut, LB soft agar motility assay -0.2 +0.3 -0.3 -0.4 -0.7
nitrogen source Gly-DL-Asp (N) +0.2 +0.1 +0.0 -1.4 -0.3
stress Spectinomycin 0.15 mg/ml -0.0 -0.1 +0.0 -1.0 -0.2
carbon source L-Alanine (C) -0.1 +0.0 +0.2 -1.1 -0.2
temperature LB 20C +0.0 -0.1 -0.2 -0.9 +0.1
denitrifying Nitrate reduction, replicate C +0.2 -0.2 -0.0 -1.0 -0.1
pH Minimal media pH9 -0.2 +0.3 -0.1 -0.9 -0.1
stress Doxycycline hyclate 0.0006 mg/ml -0.0 +0.4 -0.3 -0.6 -0.3
carbon source L-Citrulline -0.0 -0.1 +0.4 -0.8 -0.3
stress copper (II) chloride 2.5 mM -0.4 +0.0 +0.1 -0.7 +0.2
anaerobic Anaerobic, acetate donor; nitrate and iron -0.3 -0.1 +0.2 +0.2 -0.7
stress Cobalt chloride 0.32 mM +0.1 +0.1 +0.3 -0.5 -0.2
stress Cisplatin 0.006 mg/ml +0.6 -0.0 -0.1 -0.7 +0.1
stress Chloride 500 mM +0.2 +0.5 -1.2 +0.5 -0.1
stress Thallium(I) acetate 0.016 mg/ml -0.5 -0.6 +0.8 +0.3 +0.1
motility outer cut, LB soft agar motility assay -0.3 +0.1 -0.4 +0.7 +0.1
stress Thallium(I) acetate 0.016 mg/ml -0.5 -0.4 +0.7 +0.3 +0.1
stress Choline chloride 358 mM +0.1 -0.1 -0.4 +0.7 +0.1
carbon source L-Leucine (C) +0.1 +0.3 -0.1 +0.7 -0.1
stress Thallium(I) acetate 0.008 mg/ml -0.0 -0.3 +0.7 +0.4 +0.1
nitrogen source L-Histidine (N) -0.1 +0.3 +0.0 +0.7 +0.2
lb LB -0.1 -0.0 +0.1 +0.8 +0.3
carbon source L-Phenylalanine (C) +0.2 +0.1 +0.1 +0.9 -0.0
stress Paraquat dichloride 0.032 mg/mL +0.5 -0.7 +2.1 -0.2 -0.3
stress Cisplatin 0.006 mg/ml -0.0 +0.5 +0.2 +0.6 +0.0
carbon source L-Citrulline +0.1 +0.3 +0.2 +0.9 -0.0
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