Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_11080 and AO353_11085 overlap by 1 nucleotidesAO353_11085 and AO353_11090 are separated by 15 nucleotidesAO353_11090 and AO353_11095 are separated by 430 nucleotidesAO353_11095 and AO353_11100 are separated by 157 nucleotides AO353_11080: AO353_11080 - NAD synthetase, at 2,420,691 to 2,422,127 _11080 AO353_11085: AO353_11085 - NAD(P) transhydrogenase, at 2,422,127 to 2,422,450 _11085 AO353_11090: AO353_11090 - NADP transhydrogenase subunit alpha, at 2,422,466 to 2,423,587 _11090 AO353_11095: AO353_11095 - LysR family transcriptional regulator, at 2,424,018 to 2,424,938 _11095 AO353_11100: AO353_11100 - acyl-CoA dehydrogenase, at 2,425,096 to 2,426,277 _11100
Group Condition AO353_11080 AO353_11085 AO353_11090 AO353_11095 AO353_11100
carbon source Carnitine Hydrochloride (C) -1.4 -0.7 -1.1 -0.1 -0.3
carbon source Tween 20 (C) -0.8 -1.2 -1.5 +0.3 +0.0
carbon source L-Valine (C) -0.0 -0.7 -0.1 -0.6 -1.0
carbon source Tween 20 (C) -0.9 -0.8 -0.7 +0.0 +0.1
carbon source a-Ketoglutaric (C) -0.7 -0.9 -0.3 +0.1 -0.0
carbon source a-Ketoglutaric (C) -0.5 -0.5 -0.6 +0.1 -0.1
carbon source L-Leucine (C) +0.1 -0.5 +0.1 -0.2 -0.9
carbon source L-Lactate (C) -0.6 -0.5 -0.3 +0.1 -0.1
carbon source D,L-Lactate (C) -0.5 -0.9 -0.2 +0.2 +0.1
carbon source m-Inositol (C) -0.2 -0.3 -0.3 -0.2 -0.2
carbon source D-Lactate (C) -0.4 -0.4 -0.5 +0.2 -0.0
carbon source L-Lactate (C) -0.4 -0.5 -0.3 +0.1 -0.0
carbon source L-Alanine (C) -0.7 +0.2 -0.6 +0.2 -0.2
carbon source D,L-Lactate (C) -0.5 -0.3 -0.3 +0.2 -0.0
carbon source D-Trehalose (C) -0.1 -0.3 -0.2 +0.2 -0.4
pH Minimal media pH9 -0.3 -0.7 -0.2 +0.2 +0.1
anaerobic N1B4wt with N2E3m denitrifying replicate C -0.0 -0.2 +0.2 +0.1 -0.6
pH Minimal media pH9 -0.2 -0.4 -0.4 +0.2 +0.2
stress Paraquat dichloride 0.032 mg/mL -0.2 +0.4 -0.3 -0.3 -0.1
stress Doxycycline hyclate 0.0006 mg/ml +0.5 -0.2 -0.1 -0.3 +0.3
stress A22 0.01 mg/ml -0.1 +0.6 -0.2 +0.1 +0.0
survival 4C survival; 360 hrs +0.0 +0.6 +0.2 -0.2 -0.2
carbon source D-Glucose -0.1 -0.1 +0.6 -0.1 +0.5
motility outer cut, LB soft agar motility assay -0.2 -0.0 +0.6 +0.4 +0.0
carbon source L-Citrulline -0.2 +0.4 +0.5 -0.1 +0.2
carbon source acetate (C) +0.5 +0.4 +0.7 -0.8 +0.3
survival 4C survival; 672 hrs +0.3 +0.7 +1.1 -0.1 -0.7
carbon source L-Citrulline +0.0 +0.0 +0.4 +0.2 +0.5
carbon source L-Citrulline -0.1 -0.0 +0.7 +0.4 +0.4
carbon source acetate (C) +0.9 +0.3 +1.0 -0.8 +0.0
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