Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_10970 and AO353_10975 are separated by 7 nucleotidesAO353_10975 and AO353_10980 are separated by 10 nucleotidesAO353_10980 and AO353_10985 are separated by 443 nucleotidesAO353_10985 and AO353_10990 are separated by 1001 nucleotides AO353_10970: AO353_10970 - diguanylate phosphodiesterase, at 2,394,747 to 2,396,360 _10970 AO353_10975: AO353_10975 - histidine kinase, at 2,396,368 to 2,398,158 _10975 AO353_10980: AO353_10980 - chemotaxis protein CheY, at 2,398,169 to 2,399,515 _10980 AO353_10985: AO353_10985 - hypothetical protein, at 2,399,959 to 2,400,246 _10985 AO353_10990: AO353_10990 - glutamate:protein symporter, at 2,401,248 to 2,402,579 _10990
Group Condition AO353_10970 AO353_10975 AO353_10980 AO353_10985 AO353_10990
stress Nickel (II) chloride 0.625 mM +0.0 -0.2 +0.1 -1.7 -0.8
motility outer cut, LB soft agar motility assay -0.1 -0.1 -0.0 -1.4 -0.9
motility outer cut, LB soft agar motility assay +0.3 -0.4 +0.3 -1.2 -1.3
motility outer cut, LB soft agar motility assay +0.2 -0.3 -0.1 -0.6 -1.3
stress Doxycycline hyclate 0.0006 mg/ml -0.0 +0.3 -0.8 -2.8 +1.2
stress Tetracycline 0.0016 mg/ml -0.2 -0.3 -0.4 -1.8 +1.1
stress Spectinomycin 0.15 mg/ml -0.0 +0.2 +0.2 -2.1 +0.3
nitrogen source Thymine (N) -0.1 -0.1 +0.1 -1.7 +0.6
stress Cobalt chloride 0.32 mM +0.0 -0.0 +0.2 -1.5 +0.7
carbon source L-Arginine (C) +0.1 -0.3 -0.1 -1.5 +1.2
carbon source D-Trehalose (C) -0.2 -0.4 +0.0 -1.6 +1.6
carbon source Tween 20 (C) +0.1 -0.3 +0.4 -1.0 +0.7
carbon source m-Inositol (C) -0.2 -0.0 +0.2 -1.0 +1.0
carbon source L-Citrulline +0.1 +0.1 -0.1 -2.0 +1.8
stress acetate 68 mM -0.1 -0.2 +0.1 +1.0 -0.9
stress Cholin acetate 19 mM -0.0 -0.1 +0.3 -1.0 +0.9
carbon source D-Glucose -0.2 +0.3 +0.2 -1.4 +1.1
carbon source D-Trehalose (C) -0.1 -0.3 +0.1 -1.3 +1.8
carbon source L-Arginine (C) +0.0 -0.1 +0.2 -0.9 +1.1
carbon source L-Ornithine +0.0 +0.2 +0.1 -1.1 +1.0
carbon source D-Glucose -0.0 +0.3 +0.1 -0.7 +1.3
carbon source L-Citrulline -0.1 +0.4 -0.2 -1.0 +1.8
denitrifying Nitrate reduction, replicate B -0.0 +0.1 -0.6 +0.9 +0.8
carbon source L-Citrulline +0.0 +0.4 +0.0 -1.1 +1.7
stress Sisomicin 0.008 mg/ml +0.2 -0.5 +0.1 +0.3 +1.1
carbon source L-Citrulline -0.2 -0.0 +0.4 -0.6 +1.9
pH Minimal media pH9 +0.0 +0.1 +0.2 -0.9 +2.8
carbon source L-Valine (C) +0.0 +0.2 +0.1 +0.4 +1.6
carbon source acetate (C) +0.2 +0.1 +0.2 +0.1 +2.1
pH Minimal media pH9 -0.1 -0.0 +0.1 +0.2 +2.8
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