Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_10895 and AO353_10900 are separated by 37 nucleotidesAO353_10900 and AO353_10905 overlap by 8 nucleotidesAO353_10905 and AO353_10910 overlap by 1 nucleotidesAO353_10910 and AO353_10915 are separated by 66 nucleotides AO353_10895: AO353_10895 - hypothetical protein, at 2,379,726 to 2,380,439 _10895 AO353_10900: AO353_10900 - hypothetical protein, at 2,380,477 to 2,381,265 _10900 AO353_10905: AO353_10905 - zinc ABC transporter ATP-binding protein, at 2,381,258 to 2,382,043 _10905 AO353_10910: AO353_10910 - Fur family transcriptional regulator, at 2,382,043 to 2,382,525 _10910 AO353_10915: AO353_10915 - ABC transporter substrate-binding protein, at 2,382,592 to 2,383,512 _10915
Group Condition AO353_10895 AO353_10900 AO353_10905 AO353_10910 AO353_10915
stress Rifampicin 0.005 mg/ml -1.8 -1.2 -0.8 N.D. -1.3
motility outer cut, LB soft agar motility assay +0.3 -1.2 -2.1 N.D. -1.6
carbon source L-Arginine (C) -0.1 -1.5 -1.4 N.D. -1.5
carbon source L-Arginine (C) -0.0 -1.8 -1.3 N.D. -1.3
carbon source D-Lactate (C) +0.0 -1.3 -1.4 N.D. -1.3
carbon source L-Phenylalanine (C) -0.0 -1.3 -1.2 N.D. -1.5
motility outer cut, LB soft agar motility assay -0.1 -1.5 -1.1 N.D. -1.1
stress Furfuryl Alcohol 0.25 vol% -0.1 -1.1 -0.9 N.D. -1.2
stress Doxycycline hyclate 0.0006 mg/ml -1.2 -0.7 -0.7 N.D. -0.8
carbon source D-Lactate (C) +0.2 -1.3 -1.2 N.D. -1.0
stress methylglyoxal 0.009 vol% -1.2 -0.5 -0.8 N.D. -0.6
stress Tetracycline 0.0016 mg/ml -1.0 -0.5 -0.9 N.D. -0.6
carbon source acetate (C) -0.2 -1.1 -0.6 N.D. -1.0
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.2 -1.1 -0.9 N.D. -0.9
stress Doxycycline hyclate 0.0002 mg/ml -0.3 -0.9 -0.6 N.D. -1.0
stress Lomefloxacin 0.001 mM -0.0 -1.2 -0.6 N.D. -1.0
carbon source acetate (C) -0.0 -1.1 -0.8 N.D. -0.8
carbon source pyruvate (C) -0.5 -0.6 -0.8 N.D. -0.8
stress Spectinomycin 0.15 mg/ml -1.2 -0.4 -0.4 N.D. -0.6
pH Minimal media pH8 -0.1 -1.1 -0.7 N.D. -0.7
stress Spectinomycin 0.2 mg/ml -0.7 -0.7 -0.5 N.D. -0.4
carbon source D-Trehalose (C) +0.0 -1.0 -0.5 N.D. -0.6
carbon source propionate (C) +0.2 -0.9 -0.7 N.D. -0.7
motility outer cut, LB soft agar motility assay +0.7 -0.6 -0.4 N.D. -1.4
pH Minimal media pH9 +0.8 -1.2 -0.8 N.D. -0.4
stress 1-ethyl-3-methylimidazolium acetate 15 mM +0.8 -0.4 -0.5 N.D. -0.5
stress Cholin acetate 10 mM +0.8 -0.6 -0.2 N.D. -0.6
carbon source L-Ornithine +0.5 +0.6 +0.8 N.D. +0.6
denitrifying Nitrate reduction, replicate C -0.0 +1.1 +0.6 N.D. +1.0
denitrifying Nitrate reduction, replicate B +0.5 +1.4 +0.6 N.D. +1.0
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