Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_10185 and AO353_10190 overlap by 4 nucleotidesAO353_10190 and AO353_10195 are separated by 170 nucleotidesAO353_10195 and AO353_10200 are separated by 144 nucleotidesAO353_10200 and AO353_10205 overlap by 4 nucleotides AO353_10185: AO353_10185 - protease, at 2,228,536 to 2,229,585 _10185 AO353_10190: AO353_10190 - hypothetical protein, at 2,229,582 to 2,231,555 _10190 AO353_10195: AO353_10195 - AsnC family transcriptional regulator, at 2,231,726 to 2,232,199 _10195 AO353_10200: AO353_10200 - lysine transporter LysE, at 2,232,344 to 2,232,973 _10200 AO353_10205: AO353_10205 - hypothetical protein, at 2,232,970 to 2,235,117 _10205
Group Condition AO353_10185 AO353_10190 AO353_10195 AO353_10200 AO353_10205
pH Minimal media pH9 -0.5 -0.2 -0.5 -0.3 -0.0
stress Paraquat dichloride 0.032 mg/mL -0.3 +0.0 -0.5 -0.6 -0.0
denitrifying Nitrate reduction, replicate B -0.2 +0.1 -0.5 -0.7 -0.1
nitrogen source Parabanic Acid (N) +0.1 -0.1 -0.9 -0.5 +0.1
nitrogen source D-Glucosamine Hydrochloride (N) -0.2 -0.0 -0.7 -0.3 +0.0
carbon source D-Glucose -0.1 -0.2 -0.4 -0.3 -0.3
anaerobic N1B4wt with N2E3m denitrifying replicate C -0.4 +0.0 -0.4 -0.4 -0.0
carbon source L-Alanine (C) -0.3 -0.1 -0.4 -0.4 +0.1
motility outer cut, LB soft agar motility assay -0.3 +0.0 -0.3 -0.5 +0.2
stress Cisplatin 0.006 mg/ml +0.1 -0.2 -0.2 -0.7 +0.1
carbon source L-Ornithine -0.0 -0.3 +0.2 -0.6 -0.1
carbon source L-Leucine (C) -0.1 +0.3 -0.6 -0.3 +0.1
stress Dimethyl Sulfoxide 7.5 vol% -0.2 -0.2 -0.4 +0.3 -0.0
carbon source L-Citrulline +0.1 +0.2 -0.7 -0.1 -0.1
motility outer cut, LB soft agar motility assay +0.1 +0.1 -0.8 +0.1 -0.1
motility outer cut, LB soft agar motility assay -0.1 +0.1 -0.8 +0.4 -0.1
nitrogen source L-Lysine (N) -0.2 -0.0 -0.5 +0.3 +0.1
stress Thallium(I) acetate 0.008 mg/ml +0.2 -0.3 +0.2 -0.3 -0.1
survival 4C survival; 672 hrs +0.0 +0.4 -0.4 -0.3 +0.2
carbon source L-Ornithine -0.3 -0.2 -0.4 +0.6 +0.2
stress Fusidic 0.125 mg/ml +0.2 -0.3 +0.2 -0.3 +0.1
stress 1-ethyl-3-methylimidazolium chloride 170 mM -0.2 -0.1 -0.2 +0.6 -0.0
carbon source acetate (C) -0.2 +0.4 -0.7 +0.7 -0.2
carbon source L-Citrulline +0.2 -0.4 +0.3 -0.1 +0.2
pH Minimal media pH9 -0.2 +0.1 -0.7 +0.9 -0.0
carbon source L-Ornithine +0.2 -0.0 -0.2 +0.4 -0.2
denitrifying Nitrate reduction, replicate C -0.2 +0.3 -0.2 +0.4 +0.1
stress sodium fluoride 6.25 mM -0.0 +0.2 -0.3 +0.7 -0.0
stress Lomefloxacin 0.001 mM -0.3 +0.2 +0.2 +0.6 -0.1
stress Rifampicin 0.005 mg/ml +0.4 -0.2 +0.5 +0.1 +0.0
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