Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_10050 and AO353_10055 are separated by 261 nucleotidesAO353_10055 and AO353_10060 are separated by 62 nucleotidesAO353_10060 and AO353_10065 are separated by 178 nucleotidesAO353_10065 and AO353_10070 are separated by 271 nucleotides AO353_10050: AO353_10050 - diguanylate cyclase, at 2,199,590 to 2,202,457 _10050 AO353_10055: AO353_10055 - DNA helicase II, at 2,202,719 to 2,204,902 _10055 AO353_10060: AO353_10060 - transporter, at 2,204,965 to 2,205,405 _10060 AO353_10065: AO353_10065 - hypothetical protein, at 2,205,584 to 2,206,456 _10065 AO353_10070: AO353_10070 - cell wall assembly protein, at 2,206,728 to 2,207,135 _10070
Group Condition AO353_10050 AO353_10055 AO353_10060 AO353_10065 AO353_10070
survival 4C survival; 672 hrs -0.5 -1.3 +0.0 -0.5 -2.0
stress methylglyoxal 0.008 vol% -0.1 -3.2 -0.1 +0.2 -0.1
stress Spectinomycin 0.2 mg/ml +0.5 -1.2 +0.2 -2.5 -0.3
stress Spectinomycin 0.15 mg/ml -0.0 -1.0 +0.4 -2.2 -0.3
stress Fusidic 0.125 mg/ml +0.2 -2.1 -0.1 -0.8 -0.3
motility outer cut, LB soft agar motility assay +0.1 -2.1 -0.6 -0.3 -0.1
stress Lomefloxacin 0.001 mM +0.0 -2.9 +0.1 +0.1 -0.3
motility outer cut, LB soft agar motility assay +0.1 -2.6 +0.0 -0.3 -0.1
stress Doxycycline hyclate 0.0006 mg/ml -0.8 -0.5 -0.1 -0.1 -1.3
stress copper (II) chloride 2.5 mM +0.0 -1.0 +0.1 -1.7 -0.1
pH Minimal media pH9 +0.0 -1.6 +0.4 -0.8 -0.7
carbon source D-Glucose +0.0 -1.3 +0.1 -0.5 -1.0
stress Gentamicin 0.006 mg/ml -0.0 -1.3 +0.8 -2.3 +0.2
stress Furfuryl Alcohol 0.25 vol% -0.3 -1.9 +0.2 -0.2 -0.4
carbon source m-Inositol (C) -0.3 -0.7 -0.2 -0.6 -0.8
carbon source D-Serine (C) -0.4 -1.5 -0.3 +0.0 -0.4
carbon source propionate (C) -0.4 -0.9 -0.1 -1.2 +0.2
carbon source propionate (C) -0.6 -1.0 +0.2 -1.2 +0.4
pH Minimal media pH9 +0.2 -1.0 +0.2 -1.3 -0.1
carbon source L-Citrulline -0.5 -1.0 +0.1 -0.7 +0.4
stress Vancomycin 1 mg/ml +0.1 -1.6 +0.3 -0.2 -0.3
motility outer cut, LB soft agar motility assay +0.4 -2.1 -0.4 +0.2 +0.2
stress methylglyoxal 0.009 vol% +0.3 -2.3 +0.4 +0.3 -0.3
stress nitrate 200 mM +0.2 -1.9 -0.0 -0.1 +0.5
stress Rifampicin 0.005 mg/ml +0.3 -0.6 +0.5 -0.4 -1.1
carbon source acetate (C) -0.2 +0.5 +0.4 -1.6 -0.2
carbon source acetate (C) -0.1 -0.0 +0.8 -1.7 +0.2
stress Cisplatin 0.006 mg/ml +0.3 -1.8 +0.7 -0.6 +0.7
stress Cisplatin 0.006 mg/ml +0.2 -2.1 +0.7 -0.5 +1.0
stress Sisomicin 0.008 mg/ml +0.1 -1.3 +2.5 -1.7 +0.6
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