Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_09560 and AO353_09565 are separated by 72 nucleotidesAO353_09565 and AO353_09570 are separated by 404 nucleotidesAO353_09570 and AO353_09575 are separated by 80 nucleotidesAO353_09575 and AO353_09580 are separated by 15 nucleotides AO353_09560: AO353_09560 - type VI secretion protein, at 2,098,799 to 2,099,311 _09560 AO353_09565: AO353_09565 - type VI secretion protein, at 2,099,384 to 2,100,805 _09565 AO353_09570: AO353_09570 - type VI secretion protein ImpA, at 2,101,210 to 2,102,235 _09570 AO353_09575: AO353_09575 - hypothetical protein, at 2,102,316 to 2,102,825 _09575 AO353_09580: AO353_09580 - EvpB family type VI secretion protein, at 2,102,841 to 2,104,334 _09580
Group Condition AO353_09560 AO353_09565 AO353_09570 AO353_09575 AO353_09580
anaerobic Anaerobic, acetate donor; nitrate and iron -2.1 +0.4 -1.3 -2.1 +0.1
pH Minimal media pH9 -2.4 -0.3 -0.3 -0.4 +0.0
stress Cobalt chloride 0.32 mM -1.8 -0.1 -0.2 -0.0 -0.1
stress Paraquat dichloride 0.032 mg/mL -1.1 -1.0 -0.1 +0.2 -0.3
carbon source Uridine (C) -2.1 +0.3 -0.0 -0.1 -0.0
stress Gentamicin 0.006 mg/ml -1.8 +0.2 +0.1 -0.1 -0.1
stress 1-ethyl-3-methylimidazolium chloride 170 mM -2.3 +0.2 +0.2 +0.1 +0.2
nitrogen source NAG (N) -1.7 +0.0 +0.1 +0.0 -0.1
carbon source pyruvate (C) -1.8 +0.1 +0.1 +0.2 -0.0
motility outer cut, LB soft agar motility assay -3.5 +1.3 +0.6 +0.3 +0.0
nitrogen source Gly-DL-Asp (N) -1.4 +0.1 -0.1 +0.3 +0.1
carbon source L-Ornithine -1.1 +0.1 +0.2 -0.2 +0.5
carbon source L-Citrulline -1.6 +0.3 +0.4 +0.1 +0.4
carbon source Trisodium citrate (C) -1.2 +0.3 +0.4 +0.1 +0.1
stress Cholin acetate 38 mM +0.8 -0.4 -0.3 -0.4 +0.1
carbon source L-Citrulline -0.9 +0.7 +0.3 -0.3 +0.3
carbon source L-Phenylalanine (C) +0.6 -0.0 +0.3 -0.8 +0.2
motility outer cut, LB soft agar motility assay -1.0 +1.1 +0.5 +0.0 -0.1
stress Cisplatin 0.006 mg/ml +0.4 -0.2 +0.1 +1.0 +0.4
carbon source D-Trehalose (C) +0.9 +0.3 +0.3 +0.1 +0.3
motility outer cut, LB soft agar motility assay +0.7 +0.9 +0.3 +0.0 +0.1
carbon source L-Ornithine +0.8 +0.3 +0.1 +0.2 +0.6
carbon source L-Citrulline +0.3 +0.8 +0.5 -0.0 +0.5
carbon source L-Citrulline +0.9 +0.2 +0.8 -0.1 +0.5
stress Thallium(I) acetate 0.008 mg/ml +2.0 -0.1 +0.0 +0.3 +0.2
stress Polymyxin B sulfate 4 mg/ml +0.5 +0.4 +0.5 +0.7 +0.5
stress Sisomicin 0.008 mg/ml +2.0 +0.5 +0.2 +0.2 -0.2
stress Thallium(I) acetate 0.016 mg/ml +2.2 -0.1 +0.0 +0.4 +0.4
stress perchlorate 75 mM +1.1 +0.8 +0.5 +0.3 +0.2
stress nitrate 200 mM +0.8 +0.8 +0.6 +0.5 +0.3
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