Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_09150 and AO353_09155 overlap by 29 nucleotidesAO353_09155 and AO353_09160 are separated by 156 nucleotidesAO353_09160 and AO353_09165 are separated by 61 nucleotidesAO353_09165 and AO353_09170 are separated by 149 nucleotides AO353_09150: AO353_09150 - cytochrome C2, at 2,010,247 to 2,010,600 _09150 AO353_09155: AO353_09155 - amino acid dehydrogenase, at 2,010,572 to 2,011,876 _09155 AO353_09160: AO353_09160 - AsnC family transcriptional regulator, at 2,012,033 to 2,012,521 _09160 AO353_09165: AO353_09165 - Fe-S oxidoreductase, at 2,012,583 to 2,012,936 _09165 AO353_09170: AO353_09170 - FAD-dependent oxidoreductase, at 2,013,086 to 2,014,399 _09170
Group Condition AO353_09150 AO353_09155 AO353_09160 AO353_09165 AO353_09170
carbon source L-Alanine (C) -2.9 -3.2 -3.4 +0.3 -0.1
carbon source D-Alanine (C) +0.4 -3.9 -3.4 +0.2 -0.1
nitrogen source L-Tryptophan (N) -1.0 -3.7 -1.6 -0.2 -0.2
nitrogen source D-Alanine (N) +0.5 -3.8 -2.5 -0.0 -0.1
carbon source L-Tryptophan (C) +0.2 -3.7 -2.6 +0.4 +0.1
carbon source L-Valine (C) -1.1 -3.1 -0.8 +0.2 -0.1
nitrogen source Uridine (N) -0.9 -3.1 -0.5 +0.0 +0.0
pH Minimal media pH9 +0.1 -2.9 -0.5 -0.0 -0.7
motility outer cut, LB soft agar motility assay -1.6 -1.0 +0.2 -0.9 -0.3
pH Minimal media pH9 +0.6 -2.7 -0.8 -0.1 -0.6
carbon source Putrescine (C) -0.0 -2.3 -1.1 -0.3 +0.1
nitrogen source Thymine (N) +0.2 -3.0 -0.2 -0.3 +0.1
stress Paraquat dichloride 0.032 mg/mL -0.8 -0.9 -0.6 -0.3 -0.4
stress Cisplatin 0.006 mg/ml -2.5 +0.5 -0.2 +0.1 -0.2
nitrogen source Parabanic Acid (N) +0.1 -2.6 +0.1 +0.0 +0.2
nitrogen source Adenine (N) -0.9 -1.0 -0.0 +0.1 -0.2
nitrogen source Adenosine (N) -0.4 -1.5 -0.2 +0.2 -0.1
carbon source D-Serine (C) -0.8 -1.1 +0.3 -0.0 -0.0
carbon source Uridine (C) +0.3 -1.2 -0.2 -0.2 +0.1
motility outer cut, LB soft agar motility assay +0.3 -0.8 +0.2 -0.3 -0.6
nitrogen source L-Serine (N) -0.5 -1.1 +0.4 +0.1 -0.1
carbon source acetate (C) -0.3 -1.0 -0.2 -0.2 +0.6
carbon source L-Citrulline -1.5 +0.3 +0.4 +0.2 +0.0
stress Doxycycline hyclate 0.0006 mg/ml +0.5 +0.7 -0.1 -0.3 -0.4
stress Furfuryl Alcohol 0.25 vol% -0.1 +1.0 +0.4 -0.3 -0.3
stress Sisomicin 0.008 mg/ml -0.2 +1.0 -0.0 +0.6 +0.2
stress perchlorate 75 mM -0.0 +1.4 +0.3 -0.1 +0.1
stress methylglyoxal 0.009 vol% +1.1 +0.9 +0.1 -0.1 -0.3
stress Lomefloxacin 0.001 mM +0.8 +1.0 +0.1 +0.4 -0.1
stress Cisplatin 0.006 mg/ml +1.6 +0.7 +0.3 +0.1 -0.1
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