Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_09100 and AO353_09105 are separated by 190 nucleotidesAO353_09105 and AO353_09110 are separated by 152 nucleotidesAO353_09110 and AO353_09115 are separated by 98 nucleotidesAO353_09115 and AO353_09120 are separated by 268 nucleotides AO353_09100: AO353_09100 - chemotaxis protein, at 1,996,388 to 1,998,364 _09100 AO353_09105: AO353_09105 - LysR family transcriptional regulator, at 1,998,555 to 1,999,475 _09105 AO353_09110: AO353_09110 - MATE family efflux transporter, at 1,999,628 to 2,001,034 _09110 AO353_09115: AO353_09115 - diguanylate cyclase, at 2,001,133 to 2,002,797 _09115 AO353_09120: AO353_09120 - ATP-dependent DNA helicase Rep, at 2,003,066 to 2,005,075 _09120
Group Condition AO353_09100 AO353_09105 AO353_09110 AO353_09115 AO353_09120
motility outer cut, LB soft agar motility assay -0.0 +0.0 -0.6 -2.9 N.D.
stress perchlorate 75 mM +0.1 -0.3 -0.3 -1.3 N.D.
motility outer cut, LB soft agar motility assay -0.0 -0.2 -0.1 -1.5 N.D.
stress nitrate 200 mM -0.2 -0.2 -0.2 -1.3 N.D.
motility outer cut, LB soft agar motility assay -0.1 -0.3 -0.2 -1.2 N.D.
pH Minimal media pH9 -0.2 -0.3 -0.3 -0.9 N.D.
carbon source L-Valine (C) -0.2 -0.5 +0.0 -0.9 N.D.
carbon source L-Ornithine -0.2 -0.1 -0.3 -1.0 N.D.
carbon source D-Glucose -0.3 -0.2 -0.3 -0.5 N.D.
carbon source L-Citrulline -0.1 -0.5 -0.2 -0.5 N.D.
carbon source L-Tryptophan (C) +0.1 -0.2 -0.1 -0.9 N.D.
nitrogen source Gly-Glu (N) +0.1 -0.4 +0.1 -0.7 N.D.
carbon source L-Alanine (C) +0.2 -0.1 +0.1 -0.7 N.D.
carbon source L-Ornithine -0.0 +0.1 +0.5 -0.8 N.D.
stress Thallium(I) acetate 0.016 mg/ml -0.0 +0.7 -0.5 -0.0 N.D.
stress Cisplatin 0.006 mg/ml +0.2 +0.6 +0.1 -0.6 N.D.
stress Thallium(I) acetate 0.008 mg/ml -0.1 +0.6 -0.4 +0.1 N.D.
lb LB -0.3 +0.3 +0.2 +0.4 N.D.
stress copper (II) chloride 2.5 mM +0.3 -0.2 -0.1 +0.7 N.D.
survival 4C survival; 672 hrs +0.2 -0.2 +0.2 +0.8 N.D.
lb LB +0.1 +0.1 +0.3 +0.8 N.D.
stress Cholin acetate 19 mM -0.1 -0.0 +0.1 +1.4 N.D.
stress Cholin acetate 10 mM +0.1 +0.0 +0.1 +1.2 N.D.
stress acetate 17 mM +0.1 +0.0 +0.0 +1.3 N.D.
stress Cholin acetate 38 mM -0.0 -0.0 +0.1 +1.5 N.D.
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.1 +0.2 +0.1 +1.3 N.D.
stress acetate 34 mM +0.1 -0.0 +0.2 +1.6 N.D.
stress acetate 68 mM +0.1 -0.1 +0.4 +1.6 N.D.
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.3 +0.2 -0.0 +1.7 N.D.
stress 1-ethyl-3-methylimidazolium acetate 15 mM +0.1 +0.2 +0.2 +1.9 N.D.
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