Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_08935 and AO353_08940 are separated by 63 nucleotidesAO353_08940 and AO353_08945 are separated by 188 nucleotidesAO353_08945 and AO353_08950 are separated by 50 nucleotidesAO353_08950 and AO353_08955 overlap by 4 nucleotides AO353_08935: AO353_08935 - penicillin-binding protein activator LpoB, at 1,963,088 to 1,963,831 _08935 AO353_08940: AO353_08940 - threonine transporter RhtB, at 1,963,895 to 1,964,527 _08940 AO353_08945: AO353_08945 - ABC transporter ATP-binding protein, at 1,964,716 to 1,966,626 _08945 AO353_08950: AO353_08950 - hypothetical protein, at 1,966,677 to 1,967,141 _08950 AO353_08955: AO353_08955 - transcriptional regulator, at 1,967,138 to 1,968,232 _08955
Group Condition AO353_08935 AO353_08940 AO353_08945 AO353_08950 AO353_08955
anaerobic Anaerobic, acetate donor; nitrate and iron -0.3 +0.2 +0.2 -1.1 -0.7
motility outer cut, LB soft agar motility assay -0.2 -0.4 -0.3 -0.8 +0.0
motility outer cut, LB soft agar motility assay -0.3 +0.2 -0.3 -0.6 -0.2
carbon source L-Leucine (C) -0.3 -0.4 +0.5 -0.3 +0.0
stress 1-ethyl-3-methylimidazolium lysine 10.5 mM -0.0 +0.1 -0.2 +0.5 -0.6
stress Sisomicin 0.008 mg/ml -0.1 -0.1 +0.9 -0.4 -0.3
denitrifying Nitrate reduction, replicate C +0.1 +0.4 +0.4 -0.2 -0.6
anaerobic N1B4wt with N2E3m denitrifying replicate C -0.2 +0.1 +0.2 -0.3 +0.6
carbon source L-Serine (C) -0.1 +0.3 +0.6 -0.6 +0.4
carbon source L-Ornithine +0.1 -0.2 +0.0 -0.2 +1.1
stress Doxycycline hyclate 0.0006 mg/ml -0.0 +0.3 -0.8 +0.8 +0.6
denitrifying Nitrate reduction, replicate B +0.1 +0.4 +0.5 +0.4 -0.4
stress Cisplatin 0.006 mg/ml +0.1 +0.3 +0.6 -0.2 +0.5
carbon source L-Citrulline (C) +0.0 +0.1 +0.7 +0.1 +0.4
carbon source L-Ornithine +0.1 +0.0 +0.3 +0.3 +0.7
stress Nickel (II) chloride 0.625 mM +0.3 +0.4 +0.3 +0.3 +0.3
carbon source acetate (C) -0.0 +0.3 +0.6 +0.1 +0.6
stress Cisplatin 0.006 mg/ml -0.2 -0.3 +0.1 +0.3 +1.6
stress methylglyoxal 0.009 vol% -0.0 -0.3 +0.4 +0.7 +0.9
carbon source D-Glucose +0.0 +0.0 -0.0 +0.5 +1.1
carbon source acetate (C) +0.1 +0.3 +0.8 +0.4 +0.4
stress Paraquat dichloride 0.032 mg/mL +0.3 +0.3 +1.3 +0.2 +0.0
survival 4C survival; 672 hrs -0.0 +0.7 +0.9 +0.6 +0.3
carbon source D-Glucose +0.1 +0.2 +0.2 +0.9 +1.1
carbon source L-Citrulline +0.2 +0.1 +0.8 +0.5 +1.3
carbon source L-Citrulline +0.2 +0.1 +0.7 +0.7 +1.0
carbon source propionate (C) +0.1 +0.3 +0.7 +0.4 +1.5
carbon source L-Citrulline +0.0 +0.5 +0.6 +0.8 +1.1
carbon source L-Citrulline +0.2 +0.2 +1.0 +0.5 +1.3
carbon source propionate (C) +0.1 +0.1 +0.7 +0.8 +2.1
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