Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_08715 and AO353_08720 are separated by 263 nucleotidesAO353_08720 and AO353_08725 are separated by 154 nucleotidesAO353_08725 and AO353_08730 are separated by 103 nucleotidesAO353_08730 and AO353_08735 are separated by 51 nucleotides AO353_08715: AO353_08715 - ribonucleotide reductase, at 1,915,078 to 1,915,422 _08715 AO353_08720: AO353_08720 - glycine dehydrogenase, at 1,915,686 to 1,918,559 _08720 AO353_08725: AO353_08725 - aminotransferase DegT, at 1,918,714 to 1,919,853 _08725 AO353_08730: AO353_08730 - glycine cleavage system protein H, at 1,919,957 to 1,920,340 _08730 AO353_08735: AO353_08735 - glycine cleavage system protein T, at 1,920,392 to 1,921,474 _08735
Group Condition AO353_08715 AO353_08720 AO353_08725 AO353_08730 AO353_08735
carbon source D-Glucose -0.0 -0.2 -0.3 -0.5 -0.5
stress Lomefloxacin 0.001 mM -0.0 -0.0 -1.4 -0.1 +0.1
stress Sisomicin 0.008 mg/ml -0.1 +0.0 -1.1 +0.2 -0.2
stress methylglyoxal 0.009 vol% -0.4 +0.0 -0.3 +0.2 -0.6
stress Benzalkonium Chloride 0.01 mg/ml +0.2 -0.2 -0.6 +0.1 -0.6
stress Doxycycline hyclate 0.0006 mg/ml -0.2 -0.1 -1.4 +0.4 +0.2
carbon source L-Citrulline +0.6 -0.3 -0.6 +0.1 -0.7
pH Minimal media pH9 +0.0 +0.2 +0.2 -0.3 -0.9
stress Doxycycline hyclate 0.0002 mg/ml +0.2 -0.1 -0.9 +0.2 -0.1
carbon source Uridine (C) -0.3 +0.1 -0.3 +0.3 -0.4
carbon source Ethanol (C) -0.6 -0.0 +0.0 +0.5 -0.5
carbon source L-Valine (C) -0.1 -0.1 +0.4 +0.7 -1.4
pH Minimal media pH9 +0.1 +0.1 +0.3 +0.2 -1.2
carbon source acetate (C) -0.0 +0.1 +0.2 -1.0 +0.3
stress Paraquat dichloride 0.032 mg/mL +0.4 +0.1 -0.3 +0.3 -0.9
carbon source propionate (C) -0.2 +0.1 -0.0 -1.0 +1.1
stress nitrate 200 mM -0.2 -0.0 +0.1 +1.3 -1.2
stress perchlorate 75 mM -0.1 -0.0 +0.3 +0.7 -0.7
stress Cisplatin 0.006 mg/ml +0.7 +0.3 -0.5 -0.2 -0.1
stress acetate 68 mM +0.2 -0.2 +0.2 +0.9 -0.6
stress 1-ethyl-3-methylimidazolium lysine 10.5 mM +0.2 -0.1 +0.5 -0.5 +0.4
stress Cholin acetate 10 mM +0.1 -0.1 +0.0 +1.0 -0.4
motility outer cut, LB soft agar motility assay -0.4 -0.0 -0.1 +0.4 +0.8
stress acetate 17 mM +0.2 +0.1 +0.2 +0.8 -0.6
stress 1-ethyl-3-methylimidazolium acetate 15 mM +0.1 +0.0 +0.1 +1.4 -0.7
stress acetate 34 mM +0.1 +0.1 -0.1 +1.6 -0.6
carbon source propionate (C) +0.2 -0.0 +0.1 -0.2 +1.0
stress Cholin acetate 38 mM +0.3 -0.1 +0.1 +1.4 -0.5
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.3 -0.1 -0.0 +1.4 -0.3
stress Cholin acetate 19 mM +0.4 -0.0 +0.2 +1.7 -0.6
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