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Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AO353_08670 and AO353_08675 are separated by 312 nucleotides
AO353_08675 and AO353_08680 are separated by 291 nucleotides
AO353_08680 and AO353_08685 are separated by 535 nucleotides
AO353_08685 and AO353_08690 are separated by 138 nucleotides
AO353_08670: AO353_08670 - NADPH-dependent FMN reductase, at 1,904,131 to 1,904,724
_08670
AO353_08675: AO353_08675 - peroxidase, at 1,905,037 to 1,905,675
_08675
AO353_08680: AO353_08680 - porin, at 1,905,967 to 1,907,292
_08680
AO353_08685: AO353_08685 - N-acetylglutamate synthase, at 1,907,828 to 1,909,126
_08685
AO353_08690: AO353_08690 - acetylornithine deacetylase, at 1,909,265 to 1,910,413
_08690
Group
Condition
AO353
_08670
AO353
_08675
AO353
_08680
AO353
_08685
AO353
_08690
pH
Minimal media pH8
-0.2
+0.1
-0.3
-4.4
-0.2
carbon source
D-Fructose (C)
-0.1
-0.1
-0.1
-4.3
+0.2
pH
Minimal media pH6
+0.1
-0.3
-0.3
-4.0
+0.1
carbon source
Trisodium citrate (C)
+0.0
-0.1
-0.1
-4.1
-0.0
carbon source
D-Lactate (C)
-0.1
-0.2
-0.0
-3.9
-0.0
pH
Minimal media pH7
-0.1
+0.0
-0.2
-3.5
-0.3
carbon source
Trisodium citrate (C)
-0.0
-0.2
-0.3
-3.7
+0.0
carbon source
D-Lactate (C)
-0.1
-0.0
-0.2
-4.0
+0.1
carbon source
Carnitine Hydrochloride (C)
+0.1
-0.0
-0.5
-3.4
-0.3
pH
Minimal media pH6
+0.0
+0.0
-0.4
-3.7
-0.1
carbon source
D-Gluconic Acid (C)
-0.1
-0.0
+0.1
-4.1
+0.1
nitrogen source
Glycine (N)
-0.3
+0.2
-0.0
-3.6
-0.1
carbon source
succinate (C)
-0.1
+0.0
+0.0
-4.0
+0.1
nitrogen source
nitrate (N)
+0.1
+0.0
-0.2
-3.9
+0.0
carbon source
a-Ketoglutaric (C)
+0.4
+0.1
-0.2
-4.1
-0.0
carbon source
Uridine (C)
+0.4
+0.0
+0.0
-4.1
-0.1
pH
Minimal media pH9
-0.3
-0.1
+0.1
-3.7
+0.3
carbon source
L-Glutamic (C)
-0.4
+0.2
-0.0
-3.5
-0.1
carbon source
acetate (C)
-0.5
-0.5
+0.2
-3.0
+0.0
nitrogen source
L-Histidine (N)
+0.0
-0.3
+0.1
-3.7
+0.2
nitrogen source
L-Threonine (N)
-0.5
-0.2
+0.3
-3.2
-0.0
carbon source
L-Histidine (C)
-0.2
+0.2
-0.1
-3.7
+0.4
nitrogen source
D-Serine (N)
+0.2
+0.3
-0.0
-3.5
-0.3
nitrogen source
D-Alanine (N)
+0.4
+0.2
-0.1
-3.7
-0.0
carbon source
L-Glutamine (C)
-0.0
+0.3
-0.1
-3.6
+0.3
carbon source
L-Glutamic (C)
+0.2
-0.0
-0.0
-3.6
+0.4
carbon source
L-Leucine (C)
-0.4
+0.3
-0.4
-2.6
+0.4
pH
Minimal media pH9
-0.2
+0.5
+0.3
-3.3
-0.1
carbon source
m-Inositol (C)
+0.2
+0.3
-0.3
-3.0
+0.4
nitrogen source
Gly-Glu (N)
-0.1
+0.1
-0.1
-2.9
+1.2
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