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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AO353_08625 and AO353_08630 are separated by 33 nucleotides
AO353_08630 and AO353_08635 are separated by 157 nucleotides
AO353_08635 and AO353_08640 are separated by 737 nucleotides
AO353_08640 and AO353_08645 are separated by 73 nucleotides
AO353_08625: AO353_08625 - hypothetical protein, at 1,895,552 to 1,896,271
_08625
AO353_08630: AO353_08630 - hypothetical protein, at 1,896,305 to 1,897,180
_08630
AO353_08635: AO353_08635 - hypothetical protein, at 1,897,338 to 1,898,510
_08635
AO353_08640: AO353_08640 - hypothetical protein, at 1,899,248 to 1,899,976
_08640
AO353_08645: AO353_08645 - transporter, at 1,900,050 to 1,900,265
_08645
Group
Condition
AO353
_08625
AO353
_08630
AO353
_08635
AO353
_08640
AO353
_08645
motility
outer cut, LB soft agar motility assay
-0.9
-1.6
+0.0
-0.7
+0.2
carbon source
L-Ornithine
+0.3
-1.1
+0.1
-0.5
-1.4
stress
Cisplatin 0.006 mg/ml
+0.4
-1.2
+0.2
-0.5
-1.4
carbon source
L-Citrulline
+0.5
-0.2
+0.4
-0.8
-1.9
anaerobic
Anaerobic, acetate donor; nitrate and iron
-0.0
-1.3
-0.7
+0.3
-0.2
stress
Doxycycline hyclate 0.0006 mg/ml
+0.0
-0.8
+0.1
+0.4
-1.6
carbon source
L-Citrulline
+0.0
-0.4
-0.3
-1.3
+0.3
carbon source
L-Leucine (C)
-0.1
-1.3
+0.0
+0.5
-0.6
stress
sodium fluoride 6.25 mM
-0.1
+0.3
-0.0
-0.8
-0.7
carbon source
L-Glutamine (C)
+0.0
-0.1
+0.3
-0.9
-0.5
carbon source
D-Glucose
-0.0
+0.2
+0.3
-0.9
-0.7
carbon source
Ethanol (C)
+0.2
-0.6
+0.1
-0.4
-0.4
stress
Paraquat dichloride 0.032 mg/mL
-0.2
-0.6
+0.5
-0.7
+0.1
carbon source
acetate (C)
-0.3
-0.6
-0.1
-0.5
+0.6
nitrogen source
D-Alanine (N)
+0.1
+0.3
-0.2
-1.3
+0.2
carbon source
L-Alanine (C)
-0.3
+0.5
-0.4
-0.4
-0.3
carbon source
L-Ornithine
+0.1
-0.9
+0.3
+0.2
-0.6
stress
Thallium(I) acetate 0.008 mg/ml
+0.3
+0.1
+0.1
+0.1
-1.2
carbon source
L-Aspartic Acid (C)
+0.3
+0.5
+0.1
+0.6
-2.1
carbon source
L-Ornithine
+0.2
+0.4
-0.7
-0.6
+0.1
pH
Minimal media pH8
+0.1
+0.5
+0.0
-0.8
-0.3
carbon source
D-Serine (C)
+0.1
+0.2
-0.2
-1.0
+0.6
stress
Nickel (II) chloride 0.625 mM
-0.2
-0.1
+0.5
-0.7
+0.4
stress
Thallium(I) acetate 0.008 mg/ml
+0.2
+0.6
+0.2
-0.2
-0.8
stress
Cholin acetate 38 mM
+0.1
+0.1
-0.2
-0.6
+0.7
carbon source
D-Lactate (C)
-0.0
+0.4
+0.4
+0.3
-0.8
motility
outer cut, LB soft agar motility assay
+0.4
+0.5
+0.3
-0.4
-0.5
pH
Minimal media pH9
+0.5
+0.1
+0.7
-0.6
+0.1
motility
outer cut, LB soft agar motility assay
+0.2
+0.5
+0.0
-0.5
+1.2
stress
Lomefloxacin 0.001 mM
-0.0
-0.3
+0.5
+0.9
+0.9
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AO353_08635
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