Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_08560 and AO353_08565 overlap by 4 nucleotidesAO353_08565 and AO353_08570 overlap by 4 nucleotidesAO353_08570 and AO353_08575 are separated by 71 nucleotidesAO353_08575 and AO353_08580 are separated by 187 nucleotides AO353_08560: AO353_08560 - spermidine/putrescine ABC transporter permease, at 1,880,521 to 1,881,411 _08560 AO353_08565: AO353_08565 - spermidine/putrescine ABC transporter permease, at 1,881,408 to 1,882,328 _08565 AO353_08570: AO353_08570 - transporter, at 1,882,325 to 1,883,467 _08570 AO353_08575: AO353_08575 - ABC transporter substrate-binding protein, at 1,883,539 to 1,884,633 _08575 AO353_08580: AO353_08580 - spermidine/putrescine ABC transporter substrate-binding protein, at 1,884,821 to 1,885,915 _08580
Group Condition AO353_08560 AO353_08565 AO353_08570 AO353_08575 AO353_08580
carbon source Putrescine (C) -1.1 -3.2 -3.8 +0.4 -4.0
pH Minimal media pH9 -2.8 -2.4 -1.7 +0.8 -0.2
nitrogen source L-Lysine (N) -1.8 -1.8 -1.6 +1.3 -1.7
nitrogen source L-Lysine (N) -1.4 -1.6 -1.5 +1.4 -2.0
pH Minimal media pH9 -2.8 -2.0 -1.2 +1.3 -0.4
nitrogen source Adenosine (N) -1.3 -1.1 -1.0 -0.7 -0.6
stress Tetracycline 0.0016 mg/ml -0.8 -1.0 -0.8 -0.7 +0.0
stress Doxycycline hyclate 0.0006 mg/ml -0.5 -0.8 -1.7 -0.5 +0.2
carbon source propionate (C) -0.5 -0.9 -0.7 -0.6 -0.5
nitrogen source Putrescine (N) -0.4 -0.6 -1.0 +0.1 -1.2
stress Lomefloxacin 0.001 mM -0.7 -0.8 -0.9 -0.5 -0.0
stress Doxycycline hyclate 0.0002 mg/ml -0.9 -0.6 -0.7 -0.5 -0.0
carbon source L-Valine (C) -1.8 -0.6 -0.4 +0.2 -0.1
stress Spectinomycin 0.15 mg/ml -1.0 -0.5 -0.6 -0.3 -0.1
stress Spectinomycin 0.2 mg/ml -1.0 -0.7 -0.2 -0.4 -0.3
stress Rifampicin 0.005 mg/ml -0.4 -0.8 -0.7 -0.6 +0.1
carbon source D-Mannose (C) -0.6 -0.6 -0.4 -0.3 -0.4
carbon source propionate (C) -0.3 -0.5 -0.4 -0.4 -0.4
stress Cisplatin 0.006 mg/ml -0.8 -0.6 -1.0 +0.7 -0.3
stress Tetracycline 0.0008 mg/ml -0.6 -0.6 -0.3 -0.5 -0.0
stress sodium fluoride 6.25 mM -0.6 -0.6 -0.3 -0.2 -0.1
nitrogen source Parabanic Acid (N) -0.6 -0.5 -0.2 -0.0 -0.4
stress Cisplatin 0.006 mg/ml -1.5 -0.2 -0.9 +1.0 -0.0
stress Fusidic 0.125 mg/ml -0.1 -0.4 -0.6 -0.4 +0.3
carbon source acetate (C) -0.6 -0.7 -0.7 +2.8 -1.5
carbon source acetate (C) -0.6 -0.1 +0.2 +1.1 -0.7
stress acetate 34 mM +0.5 +0.3 +0.4 +0.3 +0.2
stress Cholin acetate 19 mM +0.5 +0.4 +0.6 +0.4 -0.0
stress Cholin acetate 38 mM +0.1 +0.7 +0.6 +0.5 +0.2
stress acetate 68 mM +0.6 +0.5 +0.5 +0.4 +0.1
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