Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_08480 and AO353_08485 are separated by 39 nucleotidesAO353_08485 and AO353_08490 are separated by 340 nucleotidesAO353_08490 and AO353_08495 are separated by 197 nucleotidesAO353_08495 and AO353_08500 overlap by 56 nucleotides AO353_08480: AO353_08480 - hypothetical protein, at 1,864,332 to 1,864,757 _08480 AO353_08485: AO353_08485 - threonine dehydratase, at 1,864,797 to 1,866,311 _08485 AO353_08490: AO353_08490 - ribose 5-phosphate isomerase, at 1,866,652 to 1,867,326 _08490 AO353_08495: AO353_08495 - DNA-binding protein, at 1,867,524 to 1,868,480 _08495 AO353_08500: AO353_08500 - hypothetical protein, at 1,868,425 to 1,869,090 _08500
Group Condition AO353_08480 AO353_08485 AO353_08490 AO353_08495 AO353_08500
carbon source L-Ornithine -0.3 -1.0 N.D. -0.1 -0.8
carbon source propionate (C) -0.3 -1.5 N.D. +0.1 -0.3
carbon source L-Ornithine -0.6 -0.8 N.D. -0.2 -0.5
carbon source pyruvate (C) +0.0 -1.8 N.D. -0.0 -0.1
nitrogen source Inosine (N) -0.4 -1.4 N.D. +0.0 -0.2
carbon source D-Trehalose (C) -0.0 -1.8 N.D. +0.1 -0.2
carbon source D-Lactate (C) -0.3 -1.3 N.D. -0.1 -0.2
nitrogen source L-Arginine (N) -0.4 -1.4 N.D. +0.0 -0.0
nitrogen source Urea (N) -0.1 -1.4 N.D. -0.0 -0.2
carbon source D-Glucose -0.4 -1.3 N.D. +0.1 -0.2
carbon source D-Gluconic Acid (C) -0.3 -1.3 N.D. +0.1 -0.2
carbon source L-Ornithine -0.2 -0.6 N.D. -0.2 -0.6
carbon source D,L-Lactate (C) -0.0 -1.5 N.D. -0.0 +0.0
carbon source D-Gluconic Acid (C) -0.2 -1.4 N.D. +0.0 +0.1
carbon source propionate (C) -0.4 -1.2 N.D. +0.0 +0.1
carbon source D-Lactate (C) -0.0 -1.4 N.D. +0.1 -0.1
carbon source L-Lactate (C) -0.1 -1.4 N.D. +0.1 +0.1
carbon source L-Phenylalanine (C) +0.1 -0.9 N.D. +0.1 -0.7
carbon source L-Lactate (C) -0.3 -1.1 N.D. +0.1 -0.1
carbon source L-Citrulline +0.2 -0.6 N.D. -0.1 -0.8
carbon source Putrescine (C) +0.0 -0.9 N.D. +0.1 -0.5
carbon source L-Asparagine (C) +0.4 -1.5 N.D. -0.0 -0.1
carbon source D-Trehalose (C) -0.0 -1.5 N.D. +0.0 +0.2
carbon source Glycerol (C) +0.1 -1.4 N.D. +0.1 -0.0
carbon source acetate (C) -0.1 -1.4 N.D. +0.1 +0.3
carbon source L-Asparagine (C) +0.3 -1.3 N.D. +0.0 +0.1
carbon source Glycerol (C) +0.2 -1.3 N.D. +0.2 -0.0
pH Minimal media pH6 -0.2 -1.0 N.D. -0.1 +0.4
stress Doxycycline hyclate 0.0006 mg/ml -1.0 -0.3 N.D. +0.3 +0.3
anaerobic Anaerobic, acetate donor; nitrate and iron +0.9 -0.5 N.D. -0.1 -0.4
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