Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_08105 and AO353_08110 are separated by 234 nucleotidesAO353_08110 and AO353_08115 are separated by 77 nucleotidesAO353_08115 and AO353_08120 are separated by 240 nucleotidesAO353_08120 and AO353_08125 overlap by 1 nucleotides AO353_08105: AO353_08105 - pilus assembly protein PilG, at 1,790,186 to 1,790,590 _08105 AO353_08110: AO353_08110 - glutathione synthetase, at 1,790,825 to 1,791,778 _08110 AO353_08115: AO353_08115 - energy transducer TonB, at 1,791,856 to 1,792,755 _08115 AO353_08120: AO353_08120 - hypothetical protein, at 1,792,996 to 1,793,565 _08120 AO353_08125: AO353_08125 - Holliday junction resolvase, at 1,793,565 to 1,794,002 _08125
Group Condition AO353_08105 AO353_08110 AO353_08115 AO353_08120 AO353_08125
stress methylglyoxal 0.008 vol% -0.5 -3.5 -1.6 -0.3 N.D.
carbon source propionate (C) -0.2 -2.9 -2.4 +0.7 N.D.
stress Cholin acetate 19 mM -0.2 -1.9 -1.7 -0.6 N.D.
pH Minimal media pH9 -0.6 -1.6 -1.6 -0.5 N.D.
stress 1-ethyl-3-methylimidazolium acetate 30 mM -1.2 -1.2 -2.2 +0.3 N.D.
stress Cholin acetate 38 mM -0.5 -2.1 -1.5 -0.1 N.D.
survival 4C survival; 672 hrs -1.5 -0.3 -2.1 -0.2 N.D.
stress acetate 34 mM +0.2 -2.2 -1.7 +0.1 N.D.
nitrogen source D-Glucosamine Hydrochloride (N) -0.4 +0.2 -2.9 -0.4 N.D.
stress acetate 17 mM -0.2 -1.8 -1.3 -0.2 N.D.
stress Cobalt chloride 0.32 mM -0.4 -2.7 -1.0 +0.6 N.D.
survival 4C survival; 192 hrs -0.3 -0.3 -2.7 -0.2 N.D.
stress 1-ethyl-3-methylimidazolium acetate 15 mM +0.0 -2.0 -1.4 -0.0 N.D.
stress acetate 68 mM -0.1 -2.1 -1.5 +0.5 N.D.
stress Spectinomycin 0.2 mg/ml -1.2 -1.8 -0.2 +0.0 N.D.
stress methylglyoxal 0.009 vol% +0.7 -2.5 -1.1 -0.4 N.D.
carbon source propionate (C) +0.1 -2.5 -1.6 +0.8 N.D.
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.3 -1.7 -1.5 -0.0 N.D.
stress Furfuryl Alcohol 0.25 vol% +0.6 -2.1 -1.1 -0.0 N.D.
motility outer cut, LB soft agar motility assay -0.3 -0.7 -2.1 +0.4 N.D.
motility outer cut, LB soft agar motility assay +1.0 -0.7 -2.1 -0.6 N.D.
carbon source Uridine (C) +0.2 +0.7 -2.4 -0.4 N.D.
carbon source Tween 20 (C) -0.4 -0.7 -1.2 +0.9 N.D.
stress Rifampicin 0.005 mg/ml -0.6 +0.9 -1.5 -0.2 N.D.
stress Doxycycline hyclate 0.0006 mg/ml +0.1 +0.9 -0.5 -1.9 N.D.
stress Lomefloxacin 0.001 mM -1.1 +2.2 -1.7 -0.6 N.D.
nitrogen source L-Phenylalanine (N) +0.4 +1.0 -1.5 +0.3 N.D.
stress nitrate 200 mM +0.2 +2.3 -2.0 +0.1 N.D.
stress Fusidic 0.125 mg/ml -0.1 +2.3 -0.6 -0.6 N.D.
stress perchlorate 75 mM +0.3 +3.2 -1.8 +0.1 N.D.
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