Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_08085 and AO353_08090 are separated by 38 nucleotidesAO353_08090 and AO353_08095 are separated by 186 nucleotidesAO353_08095 and AO353_08100 are separated by 10 nucleotidesAO353_08100 and AO353_08105 are separated by 57 nucleotides AO353_08085: AO353_08085 - histidine kinase, at 1,780,985 to 1,786,927 _08085 AO353_08090: AO353_08090 - chemotaxis protein, at 1,786,966 to 1,789,026 _08090 AO353_08095: AO353_08095 - protein PilI, at 1,789,213 to 1,789,752 _08095 AO353_08100: AO353_08100 - chemotaxis protein CheY, at 1,789,763 to 1,790,128 _08100 AO353_08105: AO353_08105 - pilus assembly protein PilG, at 1,790,186 to 1,790,590 _08105
Group Condition AO353_08085 AO353_08090 AO353_08095 AO353_08100 AO353_08105
stress Sisomicin 0.008 mg/ml -1.6 -0.1 -1.7 -1.9 -0.9
survival 4C survival; 672 hrs -1.4 -1.0 -0.8 -1.3 -1.5
stress Gentamicin 0.006 mg/ml -1.0 -0.3 -0.9 -2.2 -0.7
stress Spectinomycin 0.2 mg/ml -0.8 -0.4 -0.9 -1.7 -1.2
carbon source acetate (C) -0.8 +0.1 -0.6 -1.6 -0.5
carbon source D,L-Lactate (C) -0.6 -0.1 -0.4 -1.6 -0.5
stress 1-ethyl-3-methylimidazolium acetate 30 mM -0.3 -0.6 -0.1 -0.7 -1.2
carbon source L-Serine (C) -0.8 -0.4 -0.5 -0.9 -0.3
carbon source acetate (C) -0.7 -0.2 -0.1 -1.4 -0.4
carbon source D-Trehalose (C) -0.7 +0.1 -0.4 -1.1 -0.2
stress Spectinomycin 0.15 mg/ml -0.7 -0.0 -0.1 -1.0 -0.3
carbon source a-Ketoglutaric (C) -0.5 -0.1 -0.3 -0.8 -0.5
carbon source L-Ornithine -0.2 -0.0 +0.0 -1.9 -0.0
carbon source D-Lactate (C) -0.5 +0.1 -0.3 -0.8 -0.7
carbon source L-Citrulline -0.2 -0.4 -0.4 -1.0 +0.2
carbon source butyrate (C) -0.5 +0.4 +0.0 -1.3 -0.4
carbon source L-Asparagine (C) -0.4 +0.3 -0.3 -0.6 -0.7
carbon source succinate (C) -0.3 +0.2 -0.1 -1.0 -0.6
stress Doxycycline hyclate 0.0006 mg/ml +0.1 -0.7 -0.8 -0.4 +0.1
carbon source L-Valine (C) -0.1 -0.5 +0.3 -1.2 +0.0
stress Lomefloxacin 0.001 mM +0.1 -0.2 +0.4 -0.5 -1.1
stress Cholin acetate 38 mM -0.3 -0.3 -0.4 +0.7 -0.5
carbon source propionate (C) -0.5 +0.9 -0.2 -0.6 -0.2
nitrogen source Parabanic Acid (N) -0.2 +0.5 -0.1 -0.9 +0.5
stress Fusidic 0.125 mg/ml +0.6 +0.4 -0.1 +1.2 -0.1
stress nitrate 200 mM +1.0 -0.2 -0.3 +1.3 +0.2
stress methylglyoxal 0.009 vol% +0.9 -0.6 +0.7 +0.9 +0.7
motility outer cut, LB soft agar motility assay +2.0 +2.0 +1.7 +1.2 -0.3
motility outer cut, LB soft agar motility assay +1.8 +2.5 +1.4 +1.9 +0.1
motility outer cut, LB soft agar motility assay +2.3 +2.7 +1.5 +2.0 +1.0
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