Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_08065 and AO353_08070 are separated by 107 nucleotidesAO353_08070 and AO353_08075 are separated by 90 nucleotidesAO353_08075 and AO353_08080 are separated by 142 nucleotidesAO353_08080 and AO353_08085 overlap by 8 nucleotides AO353_08065: AO353_08065 - amino acid dehydrogenase, at 1,777,420 to 1,778,661 _08065 AO353_08070: AO353_08070 - LysR family transcriptional regulator, at 1,778,769 to 1,779,680 _08070 AO353_08075: AO353_08075 - hemolysin III, at 1,779,771 to 1,780,388 _08075 AO353_08080: AO353_08080 - chemotaxis protein, at 1,780,531 to 1,780,992 _08080 AO353_08085: AO353_08085 - histidine kinase, at 1,780,985 to 1,786,927 _08085
Group Condition AO353_08065 AO353_08070 AO353_08075 AO353_08080 AO353_08085
survival 4C survival; 672 hrs -0.2 -0.1 -0.2 -2.0 -1.4
stress Sisomicin 0.008 mg/ml -0.1 +0.1 +0.3 -1.4 -1.6
carbon source acetate (C) -0.2 -0.2 -0.4 -0.9 -0.8
nitrogen source Adenosine (N) -0.1 -0.2 -1.7 -0.1 -0.2
stress Gentamicin 0.006 mg/ml +0.0 -0.2 +0.1 -0.9 -1.0
carbon source L-Aspartic Acid (C) -0.6 -0.6 +0.1 -0.5 -0.4
stress Spectinomycin 0.2 mg/ml -0.0 -0.1 -0.1 -0.9 -0.8
stress acetate 68 mM -0.2 -0.1 +0.0 -0.9 -0.6
stress Doxycycline hyclate 0.0006 mg/ml -0.4 -0.4 -0.6 -0.3 +0.1
carbon source acetate (C) +0.1 +0.0 -0.3 -0.6 -0.7
anaerobic Anaerobic, acetate donor; nitrate and iron -0.8 +0.3 -0.4 -0.2 +0.1
carbon source L-Serine (C) +0.0 +0.4 -0.3 -0.2 -0.8
carbon source L-Citrulline +0.5 -0.1 +0.9 -1.8 -0.2
stress Cisplatin 0.006 mg/ml -0.0 +0.1 +0.6 -1.1 -0.1
carbon source L-Citrulline +0.2 -0.2 +1.0 -0.9 -0.3
carbon source L-Ornithine +0.4 +0.1 +0.6 -0.6 -0.4
carbon source L-Citrulline +0.4 +0.4 +0.9 -1.0 -0.2
carbon source L-Ornithine +0.4 -0.1 +0.8 -0.3 -0.2
stress nitrate 200 mM -0.1 +0.2 +0.0 -0.3 +1.0
carbon source D-Glucose +0.3 +0.2 +0.8 -0.3 -0.2
carbon source L-Ornithine +0.4 +0.2 +0.9 -0.3 -0.3
carbon source D-Ribose (C) +0.7 -0.1 +0.6 -0.4 +0.2
nitrogen source Parabanic Acid (N) +0.3 +0.7 +0.4 -0.1 -0.2
carbon source D-Glucose +0.6 +0.4 +0.9 -0.6 +0.1
carbon source L-Ornithine +0.9 +0.0 +0.7 -0.2 +0.0
carbon source L-Citrulline +0.7 +0.8 +0.8 -0.7 -0.1
stress methylglyoxal 0.009 vol% +0.1 +0.2 -0.1 +0.7 +0.9
motility outer cut, LB soft agar motility assay -0.0 +0.2 +0.1 +1.4 +2.0
motility outer cut, LB soft agar motility assay -0.2 -0.2 +0.4 +2.0 +1.8
motility outer cut, LB soft agar motility assay -0.1 -0.1 +0.0 +1.7 +2.3
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