Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E3
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 216 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
AO353_08065 and AO353_08070 are separated by 107 nucleotides
AO353_08070 and AO353_08075 are separated by 90 nucleotides
AO353_08075 and AO353_08080 are separated by 142 nucleotides
AO353_08080 and AO353_08085 overlap by 8 nucleotides
AO353_08065: AO353_08065 - amino acid dehydrogenase, at 1,777,420 to 1,778,661
_08065
AO353_08070: AO353_08070 - LysR family transcriptional regulator, at 1,778,769 to 1,779,680
_08070
AO353_08075: AO353_08075 - hemolysin III, at 1,779,771 to 1,780,388
_08075
AO353_08080: AO353_08080 - chemotaxis protein, at 1,780,531 to 1,780,992
_08080
AO353_08085: AO353_08085 - histidine kinase, at 1,780,985 to 1,786,927
_08085
Group
Condition
AO353
_08065
AO353
_08070
AO353
_08075
AO353
_08080
AO353
_08085
survival
4C survival; 672 hrs
-0.2
-0.1
-0.2
-2.0
-1.4
stress
Sisomicin 0.008 mg/ml
-0.1
+0.1
+0.3
-1.4
-1.6
carbon source
acetate (C)
-0.2
-0.2
-0.4
-0.9
-0.8
nitrogen source
Adenosine (N)
-0.1
-0.2
-1.7
-0.1
-0.2
stress
Gentamicin 0.006 mg/ml
+0.0
-0.2
+0.1
-0.9
-1.0
carbon source
L-Aspartic Acid (C)
-0.6
-0.6
+0.1
-0.5
-0.4
stress
Spectinomycin 0.2 mg/ml
-0.0
-0.1
-0.1
-0.9
-0.8
stress
acetate 68 mM
-0.2
-0.1
+0.0
-0.9
-0.6
stress
Doxycycline hyclate 0.0006 mg/ml
-0.4
-0.4
-0.6
-0.3
+0.1
carbon source
acetate (C)
+0.1
+0.0
-0.3
-0.6
-0.7
anaerobic
Anaerobic, acetate donor; nitrate and iron
-0.8
+0.3
-0.4
-0.2
+0.1
carbon source
L-Serine (C)
+0.0
+0.4
-0.3
-0.2
-0.8
carbon source
L-Citrulline
+0.5
-0.1
+0.9
-1.8
-0.2
stress
Cisplatin 0.006 mg/ml
-0.0
+0.1
+0.6
-1.1
-0.1
carbon source
L-Citrulline
+0.2
-0.2
+1.0
-0.9
-0.3
carbon source
L-Ornithine
+0.4
+0.1
+0.6
-0.6
-0.4
carbon source
L-Citrulline
+0.4
+0.4
+0.9
-1.0
-0.2
carbon source
L-Ornithine
+0.4
-0.1
+0.8
-0.3
-0.2
stress
nitrate 200 mM
-0.1
+0.2
+0.0
-0.3
+1.0
carbon source
D-Glucose
+0.3
+0.2
+0.8
-0.3
-0.2
carbon source
L-Ornithine
+0.4
+0.2
+0.9
-0.3
-0.3
carbon source
D-Ribose (C)
+0.7
-0.1
+0.6
-0.4
+0.2
nitrogen source
Parabanic Acid (N)
+0.3
+0.7
+0.4
-0.1
-0.2
carbon source
D-Glucose
+0.6
+0.4
+0.9
-0.6
+0.1
carbon source
L-Ornithine
+0.9
+0.0
+0.7
-0.2
+0.0
carbon source
L-Citrulline
+0.7
+0.8
+0.8
-0.7
-0.1
stress
methylglyoxal 0.009 vol%
+0.1
+0.2
-0.1
+0.7
+0.9
motility
outer cut, LB soft agar motility assay
-0.0
+0.2
+0.1
+1.4
+2.0
motility
outer cut, LB soft agar motility assay
-0.2
-0.2
+0.4
+2.0
+1.8
motility
outer cut, LB soft agar motility assay
-0.1
-0.1
+0.0
+1.7
+2.3
remove
AO353_08065
plot
remove
AO353_08070
plot
remove
AO353_08075
remove
AO353_08080
plot
remove
AO353_08085
plot