Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_08055 and AO353_08060 are separated by 29 nucleotidesAO353_08060 and AO353_08065 are separated by 27 nucleotidesAO353_08065 and AO353_08070 are separated by 107 nucleotidesAO353_08070 and AO353_08075 are separated by 90 nucleotides AO353_08055: AO353_08055 - ABC transporter, at 1,776,110 to 1,777,012 _08055 AO353_08060: AO353_08060 - hypothetical protein, at 1,777,042 to 1,777,392 _08060 AO353_08065: AO353_08065 - amino acid dehydrogenase, at 1,777,420 to 1,778,661 _08065 AO353_08070: AO353_08070 - LysR family transcriptional regulator, at 1,778,769 to 1,779,680 _08070 AO353_08075: AO353_08075 - hemolysin III, at 1,779,771 to 1,780,388 _08075
Group Condition AO353_08055 AO353_08060 AO353_08065 AO353_08070 AO353_08075
stress Doxycycline hyclate 0.0006 mg/ml -0.3 -1.7 -0.4 -0.4 -0.6
anaerobic Anaerobic, acetate donor; nitrate and iron +0.0 -2.0 -0.8 +0.3 -0.4
nitrogen source Adenosine (N) +0.1 -0.3 -0.1 -0.2 -1.7
carbon source L-Valine (C) -0.1 -2.2 +0.2 +0.2 +0.3
carbon source L-Aspartic Acid (C) +0.1 -0.4 -0.6 -0.6 +0.1
stress 1-ethyl-3-methylimidazolium chloride 170 mM -0.1 -0.5 -0.2 -0.5 +0.0
carbon source L-Aspartic Acid (C) -0.0 -0.3 -0.8 -0.2 +0.0
anaerobic N1B4wt with N2E3m denitrifying replicate C +0.0 -1.3 +0.1 -0.4 +0.3
motility outer cut, LB soft agar motility assay +0.2 -1.1 -0.1 -0.1 +0.0
stress sodium fluoride 6.25 mM +0.0 -0.9 +0.2 -0.0 -0.3
nitrogen source L-tyrosine (N) +0.2 -1.2 -0.1 -0.0 +0.1
stress Sisomicin 0.008 mg/ml -0.1 -1.2 -0.1 +0.1 +0.3
stress Cisplatin 0.006 mg/ml -0.5 -0.4 -0.0 +0.1 +0.6
carbon source casaminos (C) +0.1 -0.8 +0.0 +0.3 +0.1
carbon source L-Serine (C) -0.1 +0.4 +0.0 +0.4 -0.3
motility outer cut, LB soft agar motility assay +0.0 +0.6 -0.2 -0.2 +0.4
carbon source L-Ornithine -0.0 -0.4 +0.4 -0.1 +0.8
carbon source L-Ornithine -0.5 +0.2 +0.4 +0.1 +0.6
pH Minimal media pH9 -0.2 +0.7 +0.2 -0.3 +0.4
carbon source D-Ribose (C) +0.1 -0.5 +0.7 -0.1 +0.6
pH Minimal media pH9 +0.1 +0.4 +0.2 -0.1 +0.8
carbon source L-Citrulline +0.1 -0.0 +0.5 -0.1 +0.9
nitrogen source Parabanic Acid (N) -0.1 +0.3 +0.3 +0.7 +0.4
carbon source D-Glucose -0.3 +0.1 +0.6 +0.4 +0.9
carbon source D-Glucose +0.1 +0.3 +0.3 +0.2 +0.8
carbon source L-Citrulline -0.0 +0.8 +0.2 -0.2 +1.0
carbon source L-Ornithine +0.1 +0.1 +0.9 +0.0 +0.7
carbon source L-Citrulline -0.1 +0.4 +0.4 +0.4 +0.9
carbon source L-Ornithine -0.0 +0.6 +0.4 +0.2 +0.9
carbon source L-Citrulline -0.0 +0.1 +0.7 +0.8 +0.8
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