Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_07725 and AO353_07730 are separated by 48 nucleotidesAO353_07730 and AO353_07735 are separated by 121 nucleotidesAO353_07735 and AO353_07740 are separated by 193 nucleotidesAO353_07740 and AO353_07745 are separated by 86 nucleotides AO353_07725: AO353_07725 - hypothetical protein, at 1,702,889 to 1,703,290 _07725 AO353_07730: AO353_07730 - hypothetical protein, at 1,703,339 to 1,703,755 _07730 AO353_07735: AO353_07735 - AraC family transcriptional regulator, at 1,703,877 to 1,704,827 _07735 AO353_07740: AO353_07740 - ABC transporter for Carnitine, substrate-binding component (from data), at 1,705,021 to 1,705,965 _07740 AO353_07745: AO353_07745 - NADPH:quinone reductase, at 1,706,052 to 1,706,939 _07745
Group Condition AO353_07725 AO353_07730 AO353_07735 AO353_07740 AO353_07745
carbon source Carnitine Hydrochloride (C) +0.4 -0.1 -3.4 -3.1 -4.4
nitrogen source Carnitine Hydrochloride (N) -0.2 +0.1 -1.8 -1.7 -1.9
stress Doxycycline hyclate 0.0006 mg/ml -1.3 -0.0 -1.9 +0.5 +0.1
motility outer cut, LB soft agar motility assay -0.1 -0.8 -0.8 -0.4 -0.5
stress Cisplatin 0.006 mg/ml -1.2 -0.4 -0.2 -0.1 -0.2
anaerobic Anaerobic, acetate donor; nitrate and iron -0.2 +0.3 -1.2 -0.5 -0.5
carbon source acetate (C) -0.1 -0.9 -0.4 -0.4 -0.0
carbon source L-Ornithine -0.2 -0.3 -0.9 -0.0 -0.2
stress Lomefloxacin 0.001 mM -0.7 -0.7 +0.3 -0.2 -0.3
stress Rifampicin 0.005 mg/ml -0.4 -0.4 -0.2 -0.1 -0.4
nitrogen source L-Arginine (N) -0.1 -0.4 -0.3 -0.3 -0.4
carbon source D-Glucose -0.1 -0.4 -0.1 -0.2 -0.6
carbon source D-Glucose +0.1 -1.0 -0.1 +0.1 -0.5
stress acetate 68 mM -0.1 -0.8 -0.3 -0.2 +0.2
stress Sisomicin 0.008 mg/ml +0.2 -0.5 +0.0 -0.7 +0.1
nitrogen source Thymine (N) -0.0 -0.9 +0.3 -0.0 -0.2
carbon source L-Aspartic Acid (C) -0.2 +0.4 -0.4 -0.2 -0.4
stress Cisplatin 0.006 mg/ml -1.4 +0.8 +0.5 -0.0 -0.7
carbon source L-Citrulline +0.6 -0.2 -0.6 +0.1 -0.3
stress 1-ethyl-3-methylimidazolium chloride 170 mM -0.2 -0.7 -0.1 +0.2 +0.4
carbon source L-Phenylalanine (C) +0.0 -0.3 +0.1 -0.9 +0.7
carbon source L-Citrulline (C) +0.2 -0.3 -0.8 +0.3 +0.3
carbon source L-Leucine (C) +0.6 -0.7 -0.0 +0.3 -0.4
lb LB -0.2 -0.6 +0.3 +0.4 +0.1
carbon source L-Citrulline +0.4 +0.5 +0.1 -0.7 -0.3
motility outer cut, LB soft agar motility assay -0.3 -0.4 +0.7 -0.1 +0.5
carbon source L-Ornithine -0.2 -0.3 +0.9 +0.1 -0.1
denitrifying Nitrate reduction, replicate B +0.6 +0.4 +0.2 -0.5 -0.2
carbon source L-Valine (C) +0.1 +0.7 +0.2 +0.2 -0.5
survival 4C survival; 672 hrs +0.5 +0.4 +0.3 +0.2 +0.2
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