Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_07640 and AO353_07645 are separated by 149 nucleotidesAO353_07645 and AO353_07650 are separated by 52 nucleotidesAO353_07650 and AO353_07655 overlap by 4 nucleotidesAO353_07655 and AO353_07660 are separated by 14 nucleotides AO353_07640: AO353_07640 - formyltetrahydrofolate deformylase, at 1,681,432 to 1,682,289 _07640 AO353_07645: AO353_07645 - sarcosine oxidase subunit gamma, at 1,682,439 to 1,683,071 _07645 AO353_07650: AO353_07650 - sarcosine oxidase subunit alpha, at 1,683,124 to 1,686,141 _07650 AO353_07655: AO353_07655 - sarcosine oxidase subunit delta, at 1,686,138 to 1,686,467 _07655 AO353_07660: AO353_07660 - sarcosine oxidase (5,10-methylenetetrahydrofolate-forming), beta subunit (EC 1.5.3.24) (from data), at 1,686,482 to 1,687,732 _07660
Group Condition AO353_07640 AO353_07645 AO353_07650 AO353_07655 AO353_07660
carbon source Carnitine Hydrochloride (C) -0.8 -3.5 -3.6 -4.1 -3.6
nitrogen source Carnitine Hydrochloride (N) +0.1 -3.8 -3.1 -2.8 -3.1
carbon source L-Ornithine -0.1 -2.5 -0.1 -0.4 +0.2
carbon source L-Isoleucine (C) +0.1 -2.9 +0.1 -0.3 +0.4
carbon source butyrate (C) -0.0 -2.4 +0.1 +0.1 -0.3
stress A22 0.01 mg/ml -0.1 -2.5 +0.1 +0.2 -0.1
carbon source D,L-Lactate (C) -0.2 -2.3 +0.0 -0.0 +0.1
nitrogen source Glycine (N) +0.0 -2.3 -0.0 -0.0 -0.0
carbon source L-Citrulline -0.3 -3.0 +0.2 +0.3 +0.5
stress Cobalt chloride 0.32 mM -0.2 -1.8 -0.1 -0.0 -0.1
nitrogen source L-Tryptophan (N) -0.2 -2.2 +0.0 -0.0 +0.2
stress copper (II) chloride 2.5 mM -0.1 -2.1 +0.0 -0.1 +0.1
stress Benzalkonium Chloride 0.012 mg/ml -0.4 -1.5 -0.1 -0.2 -0.0
nitrogen source Uridine (N) -0.1 -2.0 -0.1 +0.1 +0.0
carbon source L-Ornithine -0.3 -1.8 +0.0 -0.1 +0.1
stress acetate 34 mM -0.0 -1.5 -0.1 -0.3 -0.1
temperature LB 30C +0.0 -1.7 -0.1 +0.1 -0.3
stress Lomefloxacin 0.001 mM +0.0 -1.7 -0.1 +0.2 -0.4
nitrogen source L-Glutamic (N) -0.0 -2.0 +0.1 +0.0 +0.1
nitrogen source L-Glutamic (N) -0.1 -1.6 +0.1 +0.2 -0.2
stress sodium fluoride 6.25 mM +0.2 -1.6 -0.1 -0.1 +0.2
stress Sisomicin 0.008 mg/ml -0.0 -2.0 +0.0 +0.5 +0.1
carbon source L-Tryptophan (C) +0.2 -1.8 +0.1 +0.2 -0.0
carbon source L-Citrulline +0.0 -1.0 +0.3 +0.5 +0.3
carbon source L-Ornithine -0.2 +1.1 +0.2 -0.5 -0.1
stress Thallium(I) acetate 0.008 mg/ml +0.1 +1.8 -0.1 -0.3 +0.1
motility outer cut, LB soft agar motility assay +0.1 +1.7 +0.1 -0.1 +0.0
carbon source acetate (C) +0.2 +1.4 +0.2 +0.2 -0.0
carbon source L-Ornithine -0.2 +1.9 +0.2 +0.4 -0.2
pH Minimal media pH9 -0.1 +2.6 +0.0 +0.3 -0.6
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