Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_07245 and AO353_07250 are separated by 257 nucleotidesAO353_07250 and AO353_07255 are separated by 13 nucleotidesAO353_07255 and AO353_07260 are separated by 195 nucleotidesAO353_07260 and AO353_07265 are separated by 47 nucleotides AO353_07245: AO353_07245 - alcohol dehydrogenase, at 1,589,429 to 1,590,577 _07245 AO353_07250: AO353_07250 - polyamine ABC transporter permease, at 1,590,835 to 1,591,659 _07250 AO353_07255: AO353_07255 - polyamine ABC transporter substrate-binding protein, at 1,591,673 to 1,592,920 _07255 AO353_07260: AO353_07260 - spermidine/putrescine ABC transporter substrate-binding protein, at 1,593,116 to 1,594,156 _07260 AO353_07265: AO353_07265 - spermidine/putrescine ABC transporter ATP-binding protein, at 1,594,204 to 1,595,328 _07265
Group Condition AO353_07245 AO353_07250 AO353_07255 AO353_07260 AO353_07265
carbon source L-Tryptophan (C) -0.2 -2.1 -0.5 +0.1 -0.2
carbon source Uridine (C) -0.2 -1.3 -0.7 +0.0 -0.1
carbon source Cytidine (C) -0.2 -1.2 -0.9 +0.1 +0.0
nitrogen source Inosine (N) -0.0 -1.6 -0.2 -0.0 -0.0
carbon source L-Aspartic Acid (C) -0.1 -1.1 -0.8 -0.1 +0.1
carbon source D-Ribose (C) +0.0 -1.2 -0.7 +0.0 -0.0
carbon source L-Citrulline (C) -0.1 -1.1 -0.4 -0.1 -0.2
carbon source L-Citrulline -0.3 -0.4 -0.5 -0.4 -0.1
pH Minimal media pH9 +0.1 -1.8 -0.1 +0.0 +0.1
carbon source D-Serine (C) -0.2 -1.0 -0.1 +0.0 -0.3
carbon source L-Serine (C) +0.1 -0.6 -0.8 -0.3 +0.1
carbon source D-Ribose (C) +0.1 -0.9 -0.8 +0.0 +0.1
carbon source pyruvate (C) +0.0 -1.2 -0.2 +0.1 -0.3
nitrogen source Uridine (N) -0.2 -0.9 -0.5 +0.1 +0.0
carbon source acetate (C) +0.1 -1.3 -0.1 -0.2 +0.0
carbon source L-Isoleucine (C) +0.0 -0.6 -0.5 +0.2 -0.4
stress methylglyoxal 0.009 vol% -0.0 -1.4 +0.1 +0.2 -0.0
stress Doxycycline hyclate 0.0006 mg/ml -0.2 -0.5 -0.1 -0.6 +0.5
carbon source L-Ornithine -0.4 -0.7 -0.5 -0.1 +0.9
carbon source L-Ornithine -0.0 -0.3 -0.3 -0.3 +1.1
stress Benzalkonium Chloride 0.012 mg/ml -0.1 +1.2 +0.1 -0.2 -0.0
pH Minimal media pH9 +0.1 +1.3 -0.2 +0.3 +0.0
carbon source D-Glucose +0.3 +1.3 +0.1 -0.1 +0.1
motility outer cut, LB soft agar motility assay +0.4 +1.2 +0.1 +0.2 -0.2
stress nitrate 200 mM +0.1 +1.0 +0.3 +0.1 +0.3
anaerobic Anaerobic, acetate donor; nitrate and iron +0.0 +1.1 +0.2 +0.1 +0.4
carbon source L-Ornithine +0.1 -0.2 -0.3 +0.2 +2.0
carbon source L-Ornithine -0.1 -0.4 -0.2 +0.1 +2.6
carbon source propionate (C) +0.1 +1.0 +1.6 +0.0 +0.2
carbon source propionate (C) -0.0 +1.3 +1.4 -0.0 +0.3
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