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Gene
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Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AO353_07230 and AO353_07235 are separated by 70 nucleotides
AO353_07235 and AO353_07240 overlap by 4 nucleotides
AO353_07240 and AO353_07245 are separated by 92 nucleotides
AO353_07245 and AO353_07250 are separated by 257 nucleotides
AO353_07230: AO353_07230 - anthranilate synthase, at 1,586,301 to 1,587,776
_07230
AO353_07235: AO353_07235 - phosphoglycolate phosphatase, at 1,587,847 to 1,588,665
_07235
AO353_07240: AO353_07240 - ribulose phosphate epimerase, at 1,588,662 to 1,589,336
_07240
AO353_07245: AO353_07245 - alcohol dehydrogenase, at 1,589,429 to 1,590,577
_07245
AO353_07250: AO353_07250 - polyamine ABC transporter permease, at 1,590,835 to 1,591,659
_07250
Group
Condition
AO353
_07230
AO353
_07235
AO353
_07240
AO353
_07245
AO353
_07250
nitrogen source
Putrescine (N)
-4.4
-0.8
N.D.
-0.2
-0.4
carbon source
D-Lactate (C)
-4.6
-0.4
N.D.
-0.1
-0.8
carbon source
Cytidine (C)
-4.5
+0.1
N.D.
-0.2
-1.2
carbon source
Uridine (C)
-4.4
+0.1
N.D.
-0.2
-1.3
carbon source
L-Citrulline (C)
-4.3
-0.3
N.D.
-0.1
-1.1
carbon source
D-Serine (C)
-4.2
-0.3
N.D.
-0.2
-1.0
nitrogen source
Uridine (N)
-4.2
-0.2
N.D.
-0.2
-0.9
carbon source
D-Mannose (C)
-4.4
-0.3
N.D.
-0.0
-0.7
nitrogen source
D-Serine (N)
-4.1
-0.1
N.D.
-0.0
-1.2
nitrogen source
Ammonium chloride (N)
-4.1
-0.5
N.D.
+0.0
-0.7
carbon source
succinate (C)
-4.1
-0.4
N.D.
-0.1
-0.6
carbon source
casaminos (C)
-4.2
-0.6
N.D.
-0.1
-0.2
carbon source
Putrescine (C)
-4.2
-0.1
N.D.
-0.0
-0.7
carbon source
a-Ketoglutaric (C)
-4.3
-0.4
N.D.
+0.0
-0.4
carbon source
L-Leucine (C)
-3.5
-1.0
N.D.
+0.0
-0.6
pH
Minimal media pH9
-4.1
+0.8
N.D.
+0.1
-1.8
nitrogen source
D-Alanine (N)
-4.2
-0.4
N.D.
+0.0
-0.4
pH
Minimal media pH8
-4.3
+0.1
N.D.
+0.0
-0.8
carbon source
acetate (C)
-3.6
-0.1
N.D.
+0.1
-1.3
nitrogen source
Gly-Glu (N)
-3.9
-0.5
N.D.
+0.1
-0.6
carbon source
D-Trehalose (C)
-3.8
-1.2
N.D.
+0.1
-0.0
carbon source
D-Ribose (C)
-4.0
+0.5
N.D.
+0.0
-1.2
carbon source
D-Ribose (C)
-4.1
+0.4
N.D.
+0.1
-0.9
carbon source
L-Lactate (C)
-4.3
-0.3
N.D.
-0.1
+0.3
carbon source
D,L-Lactate (C)
-4.3
-0.2
N.D.
-0.0
+0.5
pH
Minimal media pH6
-4.4
+0.0
N.D.
+0.0
+0.6
nitrogen source
L-Histidine (N)
-4.0
-0.1
N.D.
-0.2
+0.8
carbon source
propionate (C)
-4.0
-0.4
N.D.
-0.0
+1.3
carbon source
D-Glucose
-2.9
-0.7
N.D.
+0.3
+1.3
pH
Minimal media pH9
-3.7
+0.9
N.D.
+0.1
+1.3
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