Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_06540 and AO353_06545 overlap by 8 nucleotidesAO353_06545 and AO353_06550 overlap by 4 nucleotidesAO353_06550 and AO353_06555 are separated by 205 nucleotidesAO353_06555 and AO353_06560 are separated by 319 nucleotides AO353_06540: AO353_06540 - hypothetical protein, at 1,455,000 to 1,455,284 _06540 AO353_06545: AO353_06545 - aromatic acid decarboxylase, at 1,455,277 to 1,455,909 _06545 AO353_06550: AO353_06550 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase, at 1,455,906 to 1,457,255 _06550 AO353_06555: AO353_06555 - Fis family transcriptional regulator, at 1,457,461 to 1,459,377 _06555 AO353_06560: AO353_06560 - aldehyde dehydrogenase, at 1,459,697 to 1,461,217 _06560
Group Condition AO353_06540 AO353_06545 AO353_06550 AO353_06555 AO353_06560
carbon source propionate (C) -1.0 N.D. -2.5 +0.0 +0.1
carbon source acetate (C) -1.3 N.D. -2.3 +0.2 +0.0
pH Minimal media pH6 -3.1 N.D. -0.1 +0.1 +0.1
carbon source propionate (C) +0.3 N.D. -2.9 -0.2 +0.2
stress Cisplatin 0.006 mg/ml -1.7 N.D. -0.5 -0.4 +0.1
carbon source D-Ribose (C) -0.7 N.D. -1.3 +0.0 -0.1
stress Cisplatin 0.006 mg/ml -2.1 N.D. +0.2 +0.0 -0.2
carbon source L-Alanine (C) -2.3 N.D. -0.1 +0.0 +0.4
stress Doxycycline hyclate 0.0006 mg/ml -0.5 N.D. -1.6 +0.3 -0.1
carbon source acetate (C) +0.1 N.D. -2.3 +0.2 +0.1
stress Doxycycline hyclate 0.0002 mg/ml -1.1 N.D. -0.7 -0.1 +0.0
carbon source D-Ribose (C) +0.0 N.D. -1.5 -0.0 -0.1
carbon source L-Glutamine (C) -1.4 N.D. -0.0 -0.2 +0.1
stress Chloramphenicol 0.0025 mg/ml -1.2 N.D. -0.2 +0.1 -0.1
stress Ceftazidime 0.12 mg/ml -0.1 N.D. -1.5 +0.0 +0.1
stress Rifampicin 0.005 mg/ml -1.0 N.D. -0.6 +0.3 +0.0
nitrogen source L-Tryptophan (N) -1.4 N.D. +0.0 +0.1 +0.1
stress Cholin acetate 10 mM -1.2 N.D. -0.2 +0.1 +0.1
stress Furfuryl Alcohol 0.0625 vol% -1.0 N.D. -0.3 +0.2 +0.3
survival 4C survival; 672 hrs -1.4 N.D. +0.3 +0.2 +0.0
nitrogen source Parabanic Acid (N) -1.3 N.D. +0.1 +0.1 +0.3
motility outer cut, LB soft agar motility assay -1.0 N.D. +0.6 -0.4 +0.3
carbon source L-Citrulline +0.7 N.D. -0.6 -0.1 -0.3
pH Minimal media pH9 +1.3 N.D. -0.9 -0.0 -0.2
carbon source pyruvate (C) -0.9 N.D. +1.5 +0.0 -0.1
nitrogen source Gly-Glu (N) +1.3 N.D. -0.7 +0.1 +0.1
carbon source L-Serine (C) +0.6 N.D. +0.9 +0.1 -0.1
anaerobic Anaerobic, acetate donor; nitrate and iron +0.9 N.D. +1.1 -0.0 -0.2
carbon source pyruvate (C) +0.3 N.D. +1.6 -0.0 -0.1
motility outer cut, LB soft agar motility assay +1.5 N.D. +0.4 +0.2 +0.4
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