Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_06365 and AO353_06370 are separated by 154 nucleotidesAO353_06370 and AO353_06375 are separated by 135 nucleotidesAO353_06375 and AO353_06380 are separated by 259 nucleotidesAO353_06380 and AO353_06385 overlap by 8 nucleotides AO353_06365: AO353_06365 - hypothetical protein, at 1,420,286 to 1,420,840 _06365 AO353_06370: AO353_06370 - hypothetical protein, at 1,420,995 to 1,421,324 _06370 AO353_06375: AO353_06375 - (dimethylallyl)adenosine tRNA methylthiotransferase, at 1,421,460 to 1,422,794 _06375 AO353_06380: AO353_06380 - ATP-binding protein, at 1,423,054 to 1,424,073 _06380 AO353_06385: AO353_06385 - rRNA maturation factor, at 1,424,066 to 1,424,560 _06385
Group Condition AO353_06365 AO353_06370 AO353_06375 AO353_06380 AO353_06385
pH Minimal media pH9 -2.2 -0.5 -0.1 -0.4 N.D.
carbon source acetate (C) -2.0 -0.5 -0.2 -0.3 N.D.
motility outer cut, LB soft agar motility assay -1.9 -0.7 -0.9 +0.7 N.D.
carbon source acetate (C) -2.3 +0.1 -0.3 -0.2 N.D.
motility outer cut, LB soft agar motility assay -1.8 -0.7 -0.4 +0.3 N.D.
carbon source propionate (C) -2.8 -0.3 +0.1 +0.4 N.D.
motility outer cut, LB soft agar motility assay -2.1 +0.0 +0.0 -0.4 N.D.
carbon source propionate (C) -2.5 -0.3 +0.3 +0.1 N.D.
stress perchlorate 75 mM -1.5 -0.3 -0.5 -0.1 N.D.
pH Minimal media pH9 -1.6 -0.3 +0.0 -0.2 N.D.
stress 1-ethyl-3-methylimidazolium acetate 30 mM -1.8 +0.1 -0.2 -0.1 N.D.
stress Cholin acetate 38 mM -1.0 -0.2 -0.0 -0.5 N.D.
survival 4C survival; 672 hrs -1.0 -0.6 +0.1 -0.0 N.D.
stress Cobalt chloride 0.32 mM +0.5 -0.3 -0.2 -0.9 N.D.
carbon source L-Ornithine +0.8 -0.6 +0.3 +0.0 N.D.
stress Sisomicin 0.008 mg/ml +1.9 -0.5 -0.6 -0.2 N.D.
carbon source L-Ornithine +1.0 -0.3 +0.3 -0.2 N.D.
carbon source Uridine (C) +1.2 +0.2 +0.2 -0.7 N.D.
stress Doxycycline hyclate 0.0006 mg/ml +1.2 +0.0 -0.3 +0.2 N.D.
carbon source D-Fructose (C) +1.6 +0.1 +0.1 -0.3 N.D.
stress Benzalkonium Chloride 0.012 mg/ml +1.3 +0.3 +0.1 -0.1 N.D.
carbon source Cytidine (C) +1.6 -0.2 +0.1 +0.0 N.D.
stress Fusidic 0.125 mg/ml +1.9 +0.2 -0.5 -0.0 N.D.
stress Tetracycline 0.0016 mg/ml +1.6 -0.0 +0.1 +0.3 N.D.
stress Cisplatin 0.006 mg/ml +1.1 +1.0 -0.2 +0.2 N.D.
stress Cisplatin 0.006 mg/ml +1.7 +0.5 -0.2 +0.1 N.D.
carbon source D-Ribose (C) +2.2 -0.0 +0.1 -0.0 N.D.
stress methylglyoxal 0.009 vol% +2.1 +0.2 +0.2 -0.1 N.D.
carbon source D-Ribose (C) +2.5 +0.2 +0.0 -0.0 N.D.
stress Rifampicin 0.005 mg/ml +1.7 +0.1 +1.0 +0.3 N.D.
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