Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E3
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 216 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
AO353_06335 and AO353_06340 are separated by 148 nucleotides
AO353_06340 and AO353_06345 are separated by 74 nucleotides
AO353_06345 and AO353_06350 are separated by 440 nucleotides
AO353_06350 and AO353_06355 are separated by 18 nucleotides
AO353_06335: AO353_06335 - AMP nucleosidase, at 1,411,142 to 1,412,605
_06335
AO353_06340: AO353_06340 - acyl-CoA dehydrogenase, at 1,412,754 to 1,414,403
_06340
AO353_06345: AO353_06345 - histidine kinase, at 1,414,478 to 1,416,865
_06345
AO353_06350: AO353_06350 - hydrogenase, at 1,417,306 to 1,418,103
_06350
AO353_06355: AO353_06355 - thiamine-phosphate pyrophosphorylase, at 1,418,122 to 1,418,745
_06355
Group
Condition
AO353
_06335
AO353
_06340
AO353
_06345
AO353
_06350
AO353
_06355
pH
Minimal media pH9
+0.5
+0.0
+0.2
-3.5
-4.1
pH
Minimal media pH9
+0.6
-0.0
+0.1
-4.1
-2.6
stress
1-ethyl-3-methylimidazolium acetate 30 mM
-3.2
-0.3
-0.2
-0.2
-0.3
pH
Minimal media pH8
+0.0
+0.1
+0.1
-2.3
-1.5
stress
acetate 68 mM
-3.2
-0.0
-0.1
+0.1
-0.2
stress
Furfuryl Alcohol 0.25 vol%
-3.1
+0.1
-0.0
-0.1
-0.2
stress
Cholin acetate 38 mM
-2.5
+0.0
-0.1
-0.3
+0.3
nitrogen source
Parabanic Acid (N)
-0.4
-0.4
-0.0
-0.0
-1.8
radiation
Ionizing radiation, 126.196 Gy,
+0.2
+0.1
+0.2
-1.8
-1.3
stress
sodium fluoride 6.25 mM
+0.1
-0.1
-0.1
-0.2
-2.2
stress
1-ethyl-3-methylimidazolium lysine 10.5 mM
+0.0
+0.0
-0.1
-0.7
-1.2
carbon source
L-Citrulline
-0.0
-0.6
+0.5
-0.1
-1.2
stress
Cobalt chloride 0.32 mM
-0.4
-0.1
-0.0
+0.1
-1.0
pH
Minimal media pH8
-0.0
-0.1
+0.1
-0.8
-0.6
carbon source
acetate (C)
-0.9
+0.1
+0.7
+0.4
-1.8
stress
methylglyoxal 0.009 vol%
-1.1
-0.3
-0.2
-0.0
+0.6
denitrifying
Nitrate reduction, replicate C
-0.0
+0.2
+0.1
-0.2
-1.1
carbon source
L-Citrulline
+0.2
-0.2
+0.3
+0.1
-1.4
nitrogen source
L-tyrosine (N)
+0.0
+0.1
+0.4
-0.7
-0.5
carbon source
D-Serine (C)
-0.1
-0.1
+0.4
+0.2
-0.8
nitrogen source
L-Serine (N)
+0.1
+0.0
+0.4
+0.2
-0.9
stress
Chloride 500 mM
-0.9
-0.1
+0.5
-0.0
+0.3
stress
Nickel (II) chloride 0.625 mM
+0.1
+0.1
+0.6
-0.1
-0.7
carbon source
acetate (C)
-0.8
+0.2
+0.5
+0.4
-0.1
motility
outer cut, LB soft agar motility assay
+0.2
+0.2
+0.7
-0.2
-0.4
stress
Rifampicin 0.005 mg/ml
+0.2
-0.2
+0.9
+0.1
-0.4
anaerobic
Anaerobic, acetate donor; nitrate and iron
-0.3
-0.4
+0.1
+0.8
+0.5
stress
Gentamicin 0.006 mg/ml
+0.2
-0.2
+0.6
+0.4
+0.3
survival
4C survival; 672 hrs
+0.1
+0.1
+1.1
+0.1
+0.5
stress
Sisomicin 0.008 mg/ml
-0.1
+0.2
+0.9
+2.2
+1.1
remove
AO353_06335
plot
remove
AO353_06340
plot
remove
AO353_06345
remove
AO353_06350
plot
remove
AO353_06355
plot