Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E3
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 216 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
AO353_06105 and AO353_06110 are separated by 230 nucleotides
AO353_06110 and AO353_06115 are separated by 153 nucleotides
AO353_06115 and AO353_06120 are separated by 130 nucleotides
AO353_06120 and AO353_06125 are separated by 134 nucleotides
AO353_06105: AO353_06105 - short-chain dehydrogenase, at 1,361,780 to 1,362,466
_06105
AO353_06110: AO353_06110 - 8-oxoguanine deaminase, at 1,362,697 to 1,364,055
_06110
AO353_06115: AO353_06115 - adenosine deaminase, at 1,364,209 to 1,365,162
_06115
AO353_06120: AO353_06120 - MFS transporter, at 1,365,293 to 1,366,672
_06120
AO353_06125: AO353_06125 - ArsR family transcriptional regulator, at 1,366,807 to 1,367,541
_06125
Group
Condition
AO353
_06105
AO353
_06110
AO353
_06115
AO353
_06120
AO353
_06125
nitrogen source
Adenine (N)
+0.3
-0.1
-1.8
-0.3
-0.0
anaerobic
Anaerobic, acetate donor; nitrate and iron
+0.4
-0.8
+0.1
-0.3
-1.0
stress
Cobalt chloride 0.32 mM
-0.4
-0.1
-0.1
+0.1
-0.8
motility
outer cut, LB soft agar motility assay
+0.2
-0.1
-0.5
-0.0
-0.8
carbon source
acetate (C)
-0.1
-0.5
-0.2
+0.1
-0.4
stress
Rifampicin 0.005 mg/ml
-0.6
-0.2
+0.1
+0.0
-0.5
nitrogen source
Carnitine Hydrochloride (N)
-0.3
+0.0
-0.2
-0.1
-0.6
nitrogen source
Parabanic Acid (N)
-0.2
-0.4
-0.6
-0.1
+0.2
denitrifying
Nitrate reduction, replicate B
-1.0
+0.3
-0.0
-0.0
-0.1
carbon source
acetate (C)
+0.3
-0.0
-0.8
-0.1
-0.2
carbon source
L-Leucine (C)
+0.3
-0.0
-0.9
+0.1
-0.2
motility
outer cut, LB soft agar motility assay
-0.0
+0.3
-0.2
-0.1
-0.7
carbon source
L-Ornithine
+0.0
-0.4
-0.2
-0.3
+0.3
stress
Tetracycline 0.0016 mg/ml
+0.3
-0.3
+0.2
+0.0
-0.7
carbon source
L-Ornithine
+0.0
-0.2
-0.5
-0.3
+0.6
carbon source
L-Ornithine
+0.4
-0.3
-0.7
-0.1
+0.4
carbon source
D-Glucose
+0.5
-0.2
+0.0
-0.4
-0.3
nitrogen source
Adenosine (N)
+0.1
-0.2
-0.4
-0.2
+0.3
carbon source
L-Citrulline
+0.4
-0.7
+0.1
-0.1
+0.0
carbon source
L-Citrulline
+0.2
-0.1
-0.3
-0.2
+0.3
stress
Lomefloxacin 0.001 mM
+0.2
+0.4
+0.1
+0.0
-0.8
pH
Minimal media pH9
+0.2
-0.2
+0.3
-0.1
-0.3
stress
methylglyoxal 0.009 vol%
+0.3
-0.3
+0.3
-0.1
-0.3
stress
Doxycycline hyclate 0.0006 mg/ml
-0.1
-0.2
+0.6
+0.1
-0.4
carbon source
L-Serine (C)
+0.2
-0.3
-0.3
-0.0
+0.4
carbon source
L-Isoleucine (C)
+0.4
+0.4
-0.7
+0.0
+0.1
stress
Cisplatin 0.006 mg/ml
+0.1
-0.3
+0.1
-0.2
+0.6
stress
Cisplatin 0.006 mg/ml
-0.5
+0.2
+0.3
+0.0
+0.7
carbon source
L-Citrulline
+0.7
+0.1
-0.3
-0.1
+0.7
stress
Nalidixic 0.004 mg/ml
+0.0
+0.4
+0.4
+0.1
+0.6
remove
AO353_06105
plot
remove
AO353_06110
plot
remove
AO353_06115
remove
AO353_06120
plot
remove
AO353_06125
plot