Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_06105 and AO353_06110 are separated by 230 nucleotidesAO353_06110 and AO353_06115 are separated by 153 nucleotidesAO353_06115 and AO353_06120 are separated by 130 nucleotidesAO353_06120 and AO353_06125 are separated by 134 nucleotides AO353_06105: AO353_06105 - short-chain dehydrogenase, at 1,361,780 to 1,362,466 _06105 AO353_06110: AO353_06110 - 8-oxoguanine deaminase, at 1,362,697 to 1,364,055 _06110 AO353_06115: AO353_06115 - adenosine deaminase, at 1,364,209 to 1,365,162 _06115 AO353_06120: AO353_06120 - MFS transporter, at 1,365,293 to 1,366,672 _06120 AO353_06125: AO353_06125 - ArsR family transcriptional regulator, at 1,366,807 to 1,367,541 _06125
Group Condition AO353_06105 AO353_06110 AO353_06115 AO353_06120 AO353_06125
nitrogen source Adenine (N) +0.3 -0.1 -1.8 -0.3 -0.0
anaerobic Anaerobic, acetate donor; nitrate and iron +0.4 -0.8 +0.1 -0.3 -1.0
stress Cobalt chloride 0.32 mM -0.4 -0.1 -0.1 +0.1 -0.8
motility outer cut, LB soft agar motility assay +0.2 -0.1 -0.5 -0.0 -0.8
carbon source acetate (C) -0.1 -0.5 -0.2 +0.1 -0.4
stress Rifampicin 0.005 mg/ml -0.6 -0.2 +0.1 +0.0 -0.5
nitrogen source Carnitine Hydrochloride (N) -0.3 +0.0 -0.2 -0.1 -0.6
nitrogen source Parabanic Acid (N) -0.2 -0.4 -0.6 -0.1 +0.2
denitrifying Nitrate reduction, replicate B -1.0 +0.3 -0.0 -0.0 -0.1
carbon source acetate (C) +0.3 -0.0 -0.8 -0.1 -0.2
carbon source L-Leucine (C) +0.3 -0.0 -0.9 +0.1 -0.2
motility outer cut, LB soft agar motility assay -0.0 +0.3 -0.2 -0.1 -0.7
carbon source L-Ornithine +0.0 -0.4 -0.2 -0.3 +0.3
stress Tetracycline 0.0016 mg/ml +0.3 -0.3 +0.2 +0.0 -0.7
carbon source L-Ornithine +0.0 -0.2 -0.5 -0.3 +0.6
carbon source L-Ornithine +0.4 -0.3 -0.7 -0.1 +0.4
carbon source D-Glucose +0.5 -0.2 +0.0 -0.4 -0.3
nitrogen source Adenosine (N) +0.1 -0.2 -0.4 -0.2 +0.3
carbon source L-Citrulline +0.4 -0.7 +0.1 -0.1 +0.0
carbon source L-Citrulline +0.2 -0.1 -0.3 -0.2 +0.3
stress Lomefloxacin 0.001 mM +0.2 +0.4 +0.1 +0.0 -0.8
pH Minimal media pH9 +0.2 -0.2 +0.3 -0.1 -0.3
stress methylglyoxal 0.009 vol% +0.3 -0.3 +0.3 -0.1 -0.3
stress Doxycycline hyclate 0.0006 mg/ml -0.1 -0.2 +0.6 +0.1 -0.4
carbon source L-Serine (C) +0.2 -0.3 -0.3 -0.0 +0.4
carbon source L-Isoleucine (C) +0.4 +0.4 -0.7 +0.0 +0.1
stress Cisplatin 0.006 mg/ml +0.1 -0.3 +0.1 -0.2 +0.6
stress Cisplatin 0.006 mg/ml -0.5 +0.2 +0.3 +0.0 +0.7
carbon source L-Citrulline +0.7 +0.1 -0.3 -0.1 +0.7
stress Nalidixic 0.004 mg/ml +0.0 +0.4 +0.4 +0.1 +0.6
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