Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_06100 and AO353_06105 are separated by 614 nucleotidesAO353_06105 and AO353_06110 are separated by 230 nucleotidesAO353_06110 and AO353_06115 are separated by 153 nucleotidesAO353_06115 and AO353_06120 are separated by 130 nucleotides AO353_06100: AO353_06100 - thymidylate synthase, at 1,360,584 to 1,361,165 _06100 AO353_06105: AO353_06105 - short-chain dehydrogenase, at 1,361,780 to 1,362,466 _06105 AO353_06110: AO353_06110 - 8-oxoguanine deaminase, at 1,362,697 to 1,364,055 _06110 AO353_06115: AO353_06115 - adenosine deaminase, at 1,364,209 to 1,365,162 _06115 AO353_06120: AO353_06120 - MFS transporter, at 1,365,293 to 1,366,672 _06120
Group Condition AO353_06100 AO353_06105 AO353_06110 AO353_06115 AO353_06120
anaerobic Anaerobic, acetate donor; nitrate and iron -3.1 +0.4 -0.8 +0.1 -0.3
carbon source L-Citrulline -2.2 +0.4 -0.7 +0.1 -0.1
motility outer cut, LB soft agar motility assay -1.5 +0.2 -0.1 -0.5 -0.0
carbon source L-Citrulline -1.5 -0.2 -0.0 -0.1 -0.1
stress Cobalt chloride 0.32 mM -1.1 -0.4 -0.1 -0.1 +0.1
carbon source L-Citrulline -1.1 +0.2 -0.1 -0.3 -0.2
carbon source propionate (C) -1.2 -0.2 +0.1 -0.2 -0.1
nitrogen source Adenine (N) +0.3 +0.3 -0.1 -1.8 -0.3
nitrogen source L-Histidine (N) -1.4 +0.1 -0.2 +0.0 +0.0
carbon source L-Phenylalanine (C) -1.6 +0.1 +0.2 +0.2 -0.2
carbon source L-Isoleucine (C) -1.5 +0.4 +0.4 -0.7 +0.0
survival 4C survival; 672 hrs -1.5 +0.1 +0.1 -0.1 +0.0
carbon source acetate (C) -0.7 +0.3 -0.0 -0.8 -0.1
carbon source L-Leucine (C) -0.7 +0.3 -0.0 -0.9 +0.1
carbon source Uridine (C) -1.4 -0.1 +0.2 +0.1 -0.0
stress Doxycycline hyclate 0.0006 mg/ml -1.3 -0.1 -0.2 +0.6 +0.1
nitrogen source L-Glutamine (N) -1.2 +0.1 -0.1 +0.2 +0.1
nitrogen source Parabanic Acid (N) +0.5 -0.2 -0.4 -0.6 -0.1
stress acetate 17 mM -1.3 -0.1 +0.3 +0.2 +0.1
stress acetate 68 mM -1.2 -0.0 -0.0 +0.4 +0.1
carbon source L-Ornithine +0.8 +0.0 -0.2 -0.5 -0.3
carbon source L-Ornithine +0.7 +0.4 -0.3 -0.7 -0.1
denitrifying Nitrate reduction, replicate C +0.9 -0.3 -0.1 -0.5 +0.0
carbon source D-Glucose +0.7 +0.4 -0.3 -0.2 -0.2
temperature LB 30C +0.9 +0.2 -0.2 -0.2 +0.1
stress Sisomicin 0.008 mg/ml +1.0 +0.1 +0.3 -0.4 +0.2
carbon source D-Glucose +1.4 +0.5 -0.2 +0.0 -0.4
stress Thallium(I) acetate 0.008 mg/ml +1.4 -0.1 +0.0 +0.1 +0.1
carbon source L-Citrulline +1.4 +0.7 +0.1 -0.3 -0.1
pH Minimal media pH9 +1.5 +0.2 -0.2 +0.3 -0.1
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