Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_05945 and AO353_05950 are separated by 562 nucleotidesAO353_05950 and AO353_05955 are separated by 2 nucleotidesAO353_05955 and AO353_05960 are separated by 18 nucleotidesAO353_05960 and AO353_05965 are separated by 77 nucleotides AO353_05945: AO353_05945 - AraC family transcriptional regulator, at 1,320,502 to 1,321,515 _05945 AO353_05950: AO353_05950 - Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) (from data), at 1,322,078 to 1,323,466 _05950 AO353_05955: AO353_05955 - Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) (from data), at 1,323,469 to 1,323,960 _05955 AO353_05960: AO353_05960 - anthranilate dioxygenase reductase, at 1,323,979 to 1,325,001 _05960 AO353_05965: AO353_05965 - aromatic amino acid transporter, at 1,325,079 to 1,326,479 _05965
Group Condition AO353_05945 AO353_05950 AO353_05955 AO353_05960 AO353_05965
nitrogen source L-Tryptophan (N) -2.8 -2.6 -2.5 -2.2 -1.3
carbon source L-Tryptophan (C) -1.2 -1.4 -1.8 -1.4 +0.7
survival 4C survival; 672 hrs -0.5 -0.2 -0.3 +0.1 -0.0
carbon source Ethanol (C) -0.3 -0.2 -0.0 -0.0 -0.2
stress Lomefloxacin 0.001 mM -0.6 +0.1 -0.0 -0.0 -0.2
stress Sisomicin 0.008 mg/ml -0.3 +0.1 -0.1 -0.1 -0.3
stress Tetracycline 0.0016 mg/ml -0.1 -0.0 -0.3 +0.0 -0.2
nitrogen source Parabanic Acid (N) -0.6 +0.1 -0.2 +0.0 +0.0
carbon source L-Citrulline -0.5 +0.2 -0.5 +0.0 +0.2
stress perchlorate 75 mM -0.2 -0.1 -0.2 -0.1 +0.1
stress methylglyoxal 0.008 vol% -0.2 +0.1 -0.1 -0.2 -0.2
carbon source acetate (C) -0.4 +0.0 -0.2 +0.0 +0.1
stress Cisplatin 0.006 mg/ml +0.1 -0.3 -0.2 -0.3 +0.4
stress Cisplatin 0.006 mg/ml +0.3 +0.1 -0.4 -0.5 +0.2
stress sodium fluoride 6.25 mM +0.4 -0.2 -0.3 +0.0 -0.1
carbon source D-Glucose -0.1 +0.0 -0.3 -0.1 +0.2
carbon source L-Citrulline -0.2 +0.2 +0.0 -0.3 +0.1
stress Doxycycline hyclate 0.0006 mg/ml -0.2 -0.1 +0.3 +0.1 -0.0
anaerobic Anaerobic, acetate donor; nitrate and iron -0.3 -0.3 +0.3 +0.1 +0.3
carbon source L-Valine (C) +0.4 +0.2 -0.2 -0.3 +0.1
pH Minimal media pH9 +0.2 -0.2 +0.3 -0.0 -0.1
denitrifying Nitrate reduction, replicate B -0.1 +0.2 +0.1 +0.2 -0.2
nitrogen source L-tyrosine (N) -0.0 +0.1 +0.1 +0.5 -0.5
stress Thallium(I) acetate 0.016 mg/ml +0.1 +0.2 -0.1 -0.2 +0.1
stress Benzalkonium Chloride 0.01 mg/ml +0.3 +0.1 -0.0 +0.2 -0.2
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.3 -0.1 +0.2 +0.0 +0.0
carbon source L-Citrulline -0.0 -0.1 +0.2 +0.1 +0.3
stress Benzalkonium Chloride 0.012 mg/ml +0.1 +0.0 +0.4 +0.3 -0.0
stress methylglyoxal 0.009 vol% +0.3 +0.3 +0.4 -0.0 +0.2
motility outer cut, LB soft agar motility assay -0.2 +0.5 +0.8 +0.6 -0.1
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