Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_05935 and AO353_05940 are separated by 176 nucleotidesAO353_05940 and AO353_05945 are separated by 21 nucleotidesAO353_05945 and AO353_05950 are separated by 562 nucleotidesAO353_05950 and AO353_05955 are separated by 2 nucleotides AO353_05935: AO353_05935 - Kynureninase (EC 3.7.1.3) (from data), at 1,318,580 to 1,319,830 _05935 AO353_05940: AO353_05940 - AsnC family transcriptional regulator, at 1,320,007 to 1,320,480 _05940 AO353_05945: AO353_05945 - AraC family transcriptional regulator, at 1,320,502 to 1,321,515 _05945 AO353_05950: AO353_05950 - Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) (from data), at 1,322,078 to 1,323,466 _05950 AO353_05955: AO353_05955 - Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) (from data), at 1,323,469 to 1,323,960 _05955
Group Condition AO353_05935 AO353_05940 AO353_05945 AO353_05950 AO353_05955
nitrogen source L-Tryptophan (N) -3.2 -2.3 -2.8 -2.6 -2.5
carbon source L-Tryptophan (C) -2.8 -2.6 -1.2 -1.4 -1.8
survival 4C survival; 672 hrs -0.2 -0.2 -0.5 -0.2 -0.3
stress Sisomicin 0.008 mg/ml -0.5 -0.4 -0.3 +0.1 -0.1
anaerobic Anaerobic, acetate donor; nitrate and iron -0.1 -0.4 -0.3 -0.3 +0.3
stress Spectinomycin 0.2 mg/ml -0.1 -0.3 -0.2 +0.1 -0.3
nitrogen source Parabanic Acid (N) -0.3 +0.3 -0.6 +0.1 -0.2
carbon source Ethanol (C) -0.2 +0.1 -0.3 -0.2 -0.0
carbon source L-Citrulline +0.1 +0.4 -0.5 +0.2 -0.5
stress Cisplatin 0.006 mg/ml -0.2 -0.1 +0.3 +0.1 -0.4
stress Cisplatin 0.006 mg/ml +0.3 -0.1 +0.1 -0.3 -0.2
stress Lomefloxacin 0.001 mM +0.2 +0.2 -0.6 +0.1 -0.0
stress Cobalt chloride 0.32 mM +0.2 +0.3 -0.1 -0.1 -0.3
nitrogen source L-Glutamic (N) +0.0 -0.4 +0.2 +0.1 +0.2
stress sodium fluoride 6.25 mM +0.1 +0.3 +0.4 -0.2 -0.3
pH Minimal media pH9 -0.2 +0.2 +0.2 -0.2 +0.3
stress 1-ethyl-3-methylimidazolium acetate 30 mM -0.2 +0.2 +0.3 -0.1 +0.2
stress Benzalkonium Chloride 0.012 mg/ml -0.2 +0.4 +0.1 +0.0 +0.4
carbon source L-Ornithine +0.3 -0.1 -0.1 +0.2 +0.3
carbon source L-Citrulline +0.1 +0.6 -0.2 +0.2 +0.0
stress 1-ethyl-3-methylimidazolium acetate 15 mM +0.2 +0.5 +0.2 -0.2 +0.1
stress methylglyoxal 0.009 vol% -0.1 -0.0 +0.3 +0.3 +0.4
carbon source D-Ribose (C) +0.8 -0.1 -0.0 -0.0 +0.1
motility outer cut, LB soft agar motility assay +0.2 +0.6 +0.2 +0.1 -0.1
carbon source L-Asparagine (C) +0.2 +0.1 +0.2 +0.1 +0.3
stress Choline Lysine 12 mM +0.1 +0.3 +0.3 +0.1 +0.2
carbon source L-Valine (C) +0.2 +0.4 +0.4 +0.2 -0.2
carbon source Cytidine (C) +0.6 +0.1 +0.2 -0.0 +0.1
carbon source D-Ribose (C) +0.9 +0.1 +0.1 -0.1 +0.2
motility outer cut, LB soft agar motility assay -0.1 +0.5 -0.2 +0.5 +0.8
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