Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_05710 and AO353_05715 overlap by 1 nucleotidesAO353_05715 and AO353_05720 overlap by 4 nucleotidesAO353_05720 and AO353_05725 are separated by 163 nucleotidesAO353_05725 and AO353_05730 are separated by 496 nucleotides AO353_05710: AO353_05710 - (Fe-S)-binding protein, at 1,261,089 to 1,262,543 _05710 AO353_05715: AO353_05715 - lactate utilization protein B/C, at 1,262,543 to 1,263,214 _05715 AO353_05720: AO353_05720 - 4Fe-4S ferredoxin, at 1,263,211 to 1,266,021 _05720 AO353_05725: AO353_05725 - tmRNA, at 1,266,185 to 1,266,460 _05725 AO353_05730: AO353_05730 - hypothetical protein, at 1,266,957 to 1,267,229 _05730
Group Condition AO353_05710 AO353_05715 AO353_05720 AO353_05725 AO353_05730
carbon source D-Lactate (C) -3.8 -4.6 -4.1 -0.1 -0.3
carbon source D-Lactate (C) -3.8 -4.4 -3.7 +0.1 -0.1
carbon source D,L-Lactate (C) -3.6 -4.4 -0.6 -0.1 -0.2
carbon source D,L-Lactate (C) -3.3 -4.1 -0.7 -0.2 -0.0
carbon source L-Lactate (C) -3.5 -4.3 +0.2 +0.1 +0.1
carbon source L-Lactate (C) -3.4 -4.3 +0.3 +0.1 +0.1
carbon source Glycerol (C) -2.1 -2.6 -2.2 -0.5 +0.1
carbon source Glycerol (C) -2.0 -2.4 -2.3 -0.3 +0.2
stress Fusidic 0.125 mg/ml -0.3 -0.2 -0.5 -1.1 -0.2
stress copper (II) chloride 2.5 mM +0.0 -0.1 +0.2 -0.5 -1.5
carbon source L-Valine (C) -0.8 -0.0 -0.4 -0.1 -0.5
carbon source m-Inositol (C) -0.2 -0.2 -0.0 -0.6 -0.4
motility outer cut, LB soft agar motility assay -0.3 -0.4 -0.3 -0.2 -0.3
carbon source L-Phenylalanine (C) -0.1 -0.3 -0.0 +0.1 -1.1
stress Spectinomycin 0.2 mg/ml -0.2 -0.1 -0.2 -0.8 -0.0
anaerobic Anaerobic, acetate donor; nitrate and iron -0.1 +0.2 -0.2 -0.0 -1.1
carbon source acetate (C) -0.3 -0.2 +0.2 -0.7 -0.4
nitrogen source Uridine (N) -0.3 -0.2 +0.1 -0.1 -0.5
nitrogen source D-Glucosamine Hydrochloride (N) -0.2 -0.3 -0.1 -0.7 +0.2
carbon source acetate (C) -0.5 -0.4 +0.0 +0.3 -0.4
pH Minimal media pH9 -0.2 -0.3 -0.0 +0.4 -0.5
survival 4C survival; 672 hrs +0.1 -0.1 +0.3 -0.2 -0.7
stress Sisomicin 0.008 mg/ml -0.2 -0.6 -0.1 -0.1 +0.5
stress Spectinomycin 0.1 mg/ml -0.4 -0.3 -0.0 -0.3 +0.5
motility outer cut, LB soft agar motility assay -0.4 -0.2 -0.2 +0.4 +0.3
stress Cisplatin 0.006 mg/ml -0.2 -0.2 +0.5 -0.2 +0.1
carbon source L-Citrulline -0.1 +0.3 +0.5 -0.4 +0.2
nitrogen source Parabanic Acid (N) +0.1 -0.3 -0.1 +0.6 +0.1
carbon source D-Glucose +0.2 -0.1 -0.0 +0.5 +0.9
stress nitrate 200 mM +0.4 +0.3 +0.1 +0.5 +0.1
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