Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_05395 and AO353_05400 are separated by 10 nucleotidesAO353_05400 and AO353_05405 are separated by 10 nucleotidesAO353_05405 and AO353_05410 overlap by 1 nucleotidesAO353_05410 and AO353_05415 are separated by 120 nucleotides AO353_05395: AO353_05395 - peptide ABC transporter permease, at 1,189,568 to 1,190,578 _05395 AO353_05400: AO353_05400 - peptide transporter, at 1,190,589 to 1,191,500 _05400 AO353_05405: AO353_05405 - peptide ABC transporter ATP-binding protein, at 1,191,511 to 1,192,479 _05405 AO353_05410: AO353_05410 - peptide ABC transporter ATP-binding protein, at 1,192,479 to 1,193,450 _05410 AO353_05415: AO353_05415 - hypothetical protein, at 1,193,571 to 1,193,801 _05415
Group Condition AO353_05395 AO353_05400 AO353_05405 AO353_05410 AO353_05415
nitrogen source Gly-Glu (N) -2.6 -2.7 -3.9 -2.7 -0.4
nitrogen source Gly-DL-Asp (N) -1.8 -2.8 -3.2 -2.5 -1.2
stress methylglyoxal 0.008 vol% +0.2 +0.1 +0.0 +0.1 -4.0
motility outer cut, LB soft agar motility assay -0.4 -0.6 -0.3 -0.2 -1.8
stress Nickel (II) chloride 0.625 mM -0.8 -0.0 -0.4 -0.2 -0.7
nitrogen source D-Alanine (N) +0.1 -0.1 -0.2 -0.2 -1.3
carbon source L-Citrulline -0.1 +0.1 +0.1 -0.3 -1.4
stress Dimethyl Sulfoxide 7.5 vol% -0.1 +0.1 -0.2 +0.0 -1.4
carbon source L-Citrulline -0.1 -0.6 -0.7 -0.3 +0.4
lb LB -0.6 +0.3 +0.2 +0.1 -1.3
survival 4C survival; 672 hrs -0.3 -0.5 -0.9 -0.5 +0.9
stress Sisomicin 0.008 mg/ml +0.1 +0.3 +0.1 +0.2 -1.4
carbon source L-Citrulline -0.5 -0.1 -0.5 -0.2 +0.8
pH Minimal media pH9 -0.4 -0.3 -0.5 +0.1 +0.6
motility outer cut, LB soft agar motility assay -0.3 -0.5 +0.2 -0.5 +0.5
pH Minimal media pH9 -0.0 -0.4 -0.6 +0.0 +0.6
carbon source L-Leucine (C) +0.5 +0.2 -0.2 -0.0 -0.9
stress Doxycycline hyclate 0.0006 mg/ml +0.0 +0.3 -0.3 +0.5 -0.6
survival 4C survival; 360 hrs -0.3 -0.4 -0.2 -0.0 +0.9
carbon source L-Citrulline -0.4 +0.5 -0.4 -0.3 +0.8
nitrogen source L-Histidine (N) -0.3 -0.2 +0.0 -0.2 +0.9
carbon source D-Glucose +0.2 -0.3 -0.1 -0.2 +1.1
stress Chloride 500 mM -0.2 +0.2 -0.2 -0.1 +1.0
anaerobic Anaerobic, acetate donor; nitrate and iron +0.5 -0.0 -0.3 +0.1 +0.8
stress methylglyoxal 0.009 vol% +0.6 +0.3 +0.3 +0.4 -0.2
stress Cisplatin 0.006 mg/ml +0.1 +1.2 +0.2 -0.0 +0.1
carbon source propionate (C) +0.1 +0.9 +0.3 +0.5 -0.1
nitrogen source L-Serine (N) +0.4 +0.2 +0.1 +0.1 +0.9
carbon source propionate (C) +0.5 +0.6 +0.6 +0.7 -0.2
denitrifying Nitrate reduction, replicate B +0.2 +0.2 +0.3 +0.1 +1.5
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