Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_05375 and AO353_05380 are separated by 302 nucleotidesAO353_05380 and AO353_05385 are separated by 170 nucleotidesAO353_05385 and AO353_05390 are separated by 78 nucleotidesAO353_05390 and AO353_05395 are separated by 74 nucleotides AO353_05375: AO353_05375 - peptide ABC transporter substrate-binding protein, at 1,182,725 to 1,184,350 _05375 AO353_05380: AO353_05380 - peptide ABC transporter substrate-binding protein, at 1,184,653 to 1,186,254 _05380 AO353_05385: AO353_05385 - porin, at 1,186,425 to 1,187,819 _05385 AO353_05390: AO353_05390 - peptide ABC transporter substrate-binding protein, at 1,187,898 to 1,189,493 _05390 AO353_05395: AO353_05395 - peptide ABC transporter permease, at 1,189,568 to 1,190,578 _05395
Group Condition AO353_05375 AO353_05380 AO353_05385 AO353_05390 AO353_05395
stress Doxycycline hyclate 0.0006 mg/ml -0.4 -0.1 -0.6 -0.5 +0.0
stress Tetracycline 0.0016 mg/ml -0.1 -0.2 -0.3 -0.6 -0.1
stress Cisplatin 0.006 mg/ml +0.2 -0.2 -0.6 -0.3 +0.0
lb LB +0.1 -0.1 -0.0 -0.2 -0.6
stress methylglyoxal 0.008 vol% -0.0 -0.4 -0.2 -0.3 +0.2
stress Sisomicin 0.008 mg/ml -0.1 -0.2 -0.4 -0.2 +0.1
motility outer cut, LB soft agar motility assay -0.1 +0.2 +0.2 -0.3 -0.4
stress Cisplatin 0.006 mg/ml +0.2 -0.1 -0.2 -0.4 +0.1
motility outer cut, LB soft agar motility assay -0.1 +0.2 +0.5 -0.5 -0.3
carbon source Carnitine Hydrochloride (C) +0.1 +0.1 -0.1 -0.5 +0.2
stress Nickel (II) chloride 0.625 mM +0.2 +0.1 +0.4 -0.0 -0.8
carbon source propionate (C) -0.1 -0.2 -0.2 -0.2 +0.5
carbon source L-Leucine (C) -0.2 -0.1 -0.1 -0.1 +0.5
anaerobic Anaerobic, acetate donor; nitrate and iron +0.3 +0.2 -0.3 -0.3 +0.5
survival 4C survival; 672 hrs -0.2 +0.3 +0.8 -0.2 -0.3
carbon source L-Citrulline -0.1 +0.5 +0.3 +0.3 -0.5
carbon source L-Citrulline -0.2 +0.2 +0.3 +0.3 -0.1
stress Furfuryl Alcohol 0.25 vol% -0.0 +0.4 +0.1 -0.3 +0.5
carbon source D-Glucose -0.1 +0.3 +0.2 +0.4 -0.2
carbon source L-Ornithine +0.0 +0.3 +0.4 +0.4 -0.3
carbon source L-Citrulline +0.1 +0.4 +0.2 +0.5 -0.1
carbon source L-Ornithine -0.0 +0.4 +0.3 +0.4 +0.1
carbon source L-Ornithine -0.1 +0.4 +0.4 +0.4 +0.1
carbon source L-Ornithine +0.2 +0.3 +0.4 +0.4 +0.1
carbon source casaminos (C) -0.0 +0.1 +0.8 +0.8 -0.4
stress perchlorate 75 mM +0.1 +0.1 +0.2 +1.1 +0.0
carbon source D-Glucose -0.0 +0.4 +0.5 +0.4 +0.2
stress nitrate 200 mM -0.1 +0.1 +0.2 +1.1 +0.3
nitrogen source Gly-Glu (N) -3.0 -0.9 +3.2 +6.0 -2.6
nitrogen source Gly-DL-Asp (N) -2.8 +0.0 +5.0 +8.2 -1.8
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