Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E3
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 216 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
AO353_05375 and AO353_05380 are separated by 302 nucleotides
AO353_05380 and AO353_05385 are separated by 170 nucleotides
AO353_05385 and AO353_05390 are separated by 78 nucleotides
AO353_05390 and AO353_05395 are separated by 74 nucleotides
AO353_05375: AO353_05375 - peptide ABC transporter substrate-binding protein, at 1,182,725 to 1,184,350
_05375
AO353_05380: AO353_05380 - peptide ABC transporter substrate-binding protein, at 1,184,653 to 1,186,254
_05380
AO353_05385: AO353_05385 - porin, at 1,186,425 to 1,187,819
_05385
AO353_05390: AO353_05390 - peptide ABC transporter substrate-binding protein, at 1,187,898 to 1,189,493
_05390
AO353_05395: AO353_05395 - peptide ABC transporter permease, at 1,189,568 to 1,190,578
_05395
Group
Condition
AO353
_05375
AO353
_05380
AO353
_05385
AO353
_05390
AO353
_05395
stress
Doxycycline hyclate 0.0006 mg/ml
-0.4
-0.1
-0.6
-0.5
+0.0
stress
Tetracycline 0.0016 mg/ml
-0.1
-0.2
-0.3
-0.6
-0.1
stress
Cisplatin 0.006 mg/ml
+0.2
-0.2
-0.6
-0.3
+0.0
lb
LB
+0.1
-0.1
-0.0
-0.2
-0.6
stress
methylglyoxal 0.008 vol%
-0.0
-0.4
-0.2
-0.3
+0.2
stress
Sisomicin 0.008 mg/ml
-0.1
-0.2
-0.4
-0.2
+0.1
motility
outer cut, LB soft agar motility assay
-0.1
+0.2
+0.2
-0.3
-0.4
stress
Cisplatin 0.006 mg/ml
+0.2
-0.1
-0.2
-0.4
+0.1
motility
outer cut, LB soft agar motility assay
-0.1
+0.2
+0.5
-0.5
-0.3
carbon source
Carnitine Hydrochloride (C)
+0.1
+0.1
-0.1
-0.5
+0.2
stress
Nickel (II) chloride 0.625 mM
+0.2
+0.1
+0.4
-0.0
-0.8
carbon source
propionate (C)
-0.1
-0.2
-0.2
-0.2
+0.5
carbon source
L-Leucine (C)
-0.2
-0.1
-0.1
-0.1
+0.5
anaerobic
Anaerobic, acetate donor; nitrate and iron
+0.3
+0.2
-0.3
-0.3
+0.5
survival
4C survival; 672 hrs
-0.2
+0.3
+0.8
-0.2
-0.3
carbon source
L-Citrulline
-0.1
+0.5
+0.3
+0.3
-0.5
carbon source
L-Citrulline
-0.2
+0.2
+0.3
+0.3
-0.1
stress
Furfuryl Alcohol 0.25 vol%
-0.0
+0.4
+0.1
-0.3
+0.5
carbon source
D-Glucose
-0.1
+0.3
+0.2
+0.4
-0.2
carbon source
L-Ornithine
+0.0
+0.3
+0.4
+0.4
-0.3
carbon source
L-Citrulline
+0.1
+0.4
+0.2
+0.5
-0.1
carbon source
L-Ornithine
-0.0
+0.4
+0.3
+0.4
+0.1
carbon source
L-Ornithine
-0.1
+0.4
+0.4
+0.4
+0.1
carbon source
L-Ornithine
+0.2
+0.3
+0.4
+0.4
+0.1
carbon source
casaminos (C)
-0.0
+0.1
+0.8
+0.8
-0.4
stress
perchlorate 75 mM
+0.1
+0.1
+0.2
+1.1
+0.0
carbon source
D-Glucose
-0.0
+0.4
+0.5
+0.4
+0.2
stress
nitrate 200 mM
-0.1
+0.1
+0.2
+1.1
+0.3
nitrogen source
Gly-Glu (N)
-3.0
-0.9
+3.2
+6.0
-2.6
nitrogen source
Gly-DL-Asp (N)
-2.8
+0.0
+5.0
+8.2
-1.8
remove
AO353_05375
plot
remove
AO353_05380
plot
remove
AO353_05385
remove
AO353_05390
plot
remove
AO353_05395
plot