Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_05320 and AO353_05325 are separated by 11 nucleotidesAO353_05325 and AO353_05330 are separated by 106 nucleotidesAO353_05330 and AO353_05335 are separated by 96 nucleotidesAO353_05335 and AO353_05340 overlap by 8 nucleotides AO353_05320: AO353_05320 - hypothetical protein, at 1,171,232 to 1,171,582 _05320 AO353_05325: AO353_05325 - GntR family transcriptional regulator, at 1,171,594 to 1,172,340 _05325 AO353_05330: AO353_05330 - ABC transporter ATP-binding protein, at 1,172,447 to 1,174,174 _05330 AO353_05335: AO353_05335 - chemotaxis protein CheY, at 1,174,271 to 1,174,831 _05335 AO353_05340: AO353_05340 - histidine kinase, at 1,174,824 to 1,176,086 _05340
Group Condition AO353_05320 AO353_05325 AO353_05330 AO353_05335 AO353_05340
motility outer cut, LB soft agar motility assay -0.8 -0.7 +0.0 N.D. -2.4
motility outer cut, LB soft agar motility assay -1.3 +0.1 -0.3 N.D. -1.5
survival 4C survival; 192 hrs -0.1 -0.5 -0.2 N.D. -1.4
carbon source D-Lactate (C) +0.1 -0.7 +0.1 N.D. -1.8
carbon source L-Asparagine (C) -0.1 -0.8 -0.1 N.D. -1.0
carbon source D-Trehalose (C) +0.1 -1.2 -0.1 N.D. -0.9
carbon source L-Asparagine (C) -0.1 -0.6 -0.1 N.D. -1.0
carbon source D-Lactate (C) +0.2 -0.6 +0.2 N.D. -1.4
carbon source propionate (C) -0.0 -1.1 +0.2 N.D. -0.6
carbon source propionate (C) -0.0 -1.1 +0.1 N.D. -0.4
anaerobic N1B4wt with N2E3m denitrifying replicate C +0.1 -1.6 +0.2 N.D. -0.1
pH Minimal media pH9 -0.0 -1.5 -0.2 N.D. +0.5
carbon source L-Citrulline +0.3 -1.7 -0.1 N.D. +0.5
carbon source L-Citrulline -0.4 -1.0 -0.2 N.D. +0.7
denitrifying Nitrate reduction, replicate C +0.3 -0.8 +0.2 N.D. -0.6
pH Minimal media pH9 -0.1 -1.4 -0.0 N.D. +0.9
motility outer cut, LB soft agar motility assay +0.4 +0.0 +0.1 N.D. -1.2
carbon source L-Citrulline +0.1 -1.6 +0.1 N.D. +0.9
carbon source D-Alanine (C) +0.2 -0.8 -0.3 N.D. +0.5
carbon source L-Arginine (C) +0.2 -1.1 -0.1 N.D. +0.5
nitrogen source L-Lysine (N) +0.2 -1.1 +0.0 N.D. +0.5
stress Lomefloxacin 0.001 mM -0.6 -0.3 -0.0 N.D. +0.9
carbon source acetate (C) +0.3 +0.1 +0.4 N.D. -0.9
carbon source D-Ribose (C) +0.2 -0.2 +0.1 N.D. +1.2
carbon source D-Ribose (C) +0.0 -0.1 +0.1 N.D. +1.4
stress perchlorate 75 mM -0.1 +0.3 +0.0 N.D. +1.5
stress Fusidic 0.125 mg/ml +0.1 -0.0 +0.0 N.D. +1.8
stress Paraquat dichloride 0.032 mg/mL +0.0 -0.4 +0.1 N.D. +2.3
stress nitrate 200 mM +0.1 +0.3 +0.1 N.D. +2.1
stress Sisomicin 0.008 mg/ml +0.0 -0.1 +0.4 N.D. +4.5
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