Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_04920 and AO353_04925 overlap by 1 nucleotidesAO353_04925 and AO353_04930 are separated by 195 nucleotidesAO353_04930 and AO353_04935 are separated by 153 nucleotidesAO353_04935 and AO353_04940 are separated by 54 nucleotides AO353_04920: AO353_04920 - alpha/beta hydrolase, at 1,087,998 to 1,088,900 _04920 AO353_04925: AO353_04925 - aldolase, at 1,088,900 to 1,089,682 _04925 AO353_04930: AO353_04930 - flavodoxin, at 1,089,878 to 1,090,333 _04930 AO353_04935: AO353_04935 - histidine kinase, at 1,090,487 to 1,090,960 _04935 AO353_04940: AO353_04940 - hypothetical protein, at 1,091,015 to 1,091,620 _04940
Group Condition AO353_04920 AO353_04925 AO353_04930 AO353_04935 AO353_04940
carbon source propionate (C) -0.2 -0.6 -4.3 -0.1 -0.5
carbon source propionate (C) -0.3 -0.2 -2.8 -0.3 -0.8
carbon source L-Leucine (C) -0.1 -0.9 -0.5 -0.9 -0.5
stress Cisplatin 0.006 mg/ml -0.2 -0.1 -0.4 -0.4 -1.5
nitrogen source Gly-DL-Asp (N) -0.0 -0.8 -1.1 -0.1 -0.1
stress Benzalkonium Chloride 0.012 mg/ml -0.3 -0.5 -0.8 +0.2 -0.5
nitrogen source Parabanic Acid (N) -0.2 +0.2 -1.2 -0.0 -0.7
carbon source casaminos (C) +0.1 -0.7 -0.7 -0.3 -0.2
carbon source L-Alanine (C) -0.1 -1.2 -0.1 +0.1 -0.4
stress Thallium(I) acetate 0.016 mg/ml -0.1 -0.1 -1.7 +0.2 +0.2
stress Thallium(I) acetate 0.008 mg/ml -0.2 -0.3 -1.1 +0.3 +0.0
carbon source L-Phenylalanine (C) -0.2 +0.3 -0.8 +0.2 -0.5
anaerobic N1B4wt with N2E3m denitrifying replicate C -0.1 +0.5 -1.1 -0.2 -0.1
carbon source L-Ornithine -0.2 +0.1 -0.7 +0.6 -0.7
stress Thallium(I) acetate 0.008 mg/ml +0.2 +0.2 -1.5 +0.3 +0.0
stress Thallium(I) acetate 0.016 mg/ml +0.1 -0.1 -1.2 +0.8 -0.1
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.3 -0.1 -0.7 -0.4 +0.4
anaerobic Anaerobic, acetate donor; nitrate and iron -0.1 +0.7 +0.1 -0.7 -0.4
stress Cholin acetate 38 mM +0.1 +0.3 -1.2 +0.2 +0.6
stress Spectinomycin 0.2 mg/ml +0.2 -0.2 +0.8 -0.3 -0.5
stress 1-ethyl-3-methylimidazolium acetate 15 mM -0.1 +0.5 -0.7 -0.1 +0.6
stress Fusidic 0.125 mg/ml -0.2 +0.2 +1.0 -0.4 -0.1
stress Cobalt chloride 0.16 mM +0.2 +0.3 -0.6 -0.1 +0.7
motility outer cut, LB soft agar motility assay +0.1 -0.4 +1.1 +1.1 -0.7
motility outer cut, LB soft agar motility assay -0.1 -0.8 +1.0 +1.2 -0.0
stress acetate 34 mM +0.1 +0.4 +0.6 +0.1 +0.7
stress Furfuryl Alcohol 0.25 vol% +0.2 +0.3 +1.2 -0.0 +0.3
stress Cholin acetate 10 mM +0.2 +0.5 -0.0 +0.2 +1.2
pH Minimal media pH9 -0.3 +0.7 +1.2 +0.5 +0.3
motility outer cut, LB soft agar motility assay +0.3 +0.2 +2.2 +1.2 +0.6
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