Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_04755 and AO353_04760 are separated by 435 nucleotidesAO353_04760 and AO353_04765 are separated by 343 nucleotidesAO353_04765 and AO353_04775 are separated by 4812 nucleotidesAO353_04775 and AO353_04780 are separated by 56 nucleotides AO353_04755: AO353_04755 - toxin, at 1,037,438 to 1,042,069 _04755 AO353_04760: AO353_04760 - hypothetical protein, at 1,042,505 to 1,042,864 _04760 AO353_04765: AO353_04765 - hypothetical protein, at 1,043,208 to 1,048,343 _04765 AO353_04775: AO353_04775 - hypothetical protein, at 1,053,156 to 1,053,683 _04775 AO353_04780: AO353_04780 - hypothetical protein, at 1,053,740 to 1,055,698 _04780
Group Condition AO353_04755 AO353_04760 AO353_04765 AO353_04775 AO353_04780
carbon source L-Serine (C) -0.1 -0.2 -0.1 -0.9 +0.2
carbon source propionate (C) -0.0 -0.1 -0.1 -0.3 -0.5
denitrifying Nitrate reduction, replicate C +0.2 -0.2 +0.1 -0.6 -0.3
carbon source D-Glucose +0.1 +0.2 -0.2 -0.6 +0.2
anaerobic Anaerobic, acetate donor; nitrate and iron -0.2 +0.2 +0.1 -0.6 +0.1
carbon source acetate (C) +0.1 -0.2 -0.1 +0.3 -0.2
motility outer cut, LB soft agar motility assay +0.0 +0.1 -0.1 +0.4 -0.6
carbon source L-Citrulline -0.0 -0.4 +0.0 +0.7 -0.2
nitrogen source Glycine (N) +0.0 +0.2 -0.0 +0.3 -0.3
nitrogen source nitrate (N) -0.0 -0.2 +0.1 +0.5 -0.1
carbon source L-Ornithine -0.1 -0.3 -0.1 +0.8 -0.0
stress Thallium(I) acetate 0.008 mg/ml +0.2 -0.0 +0.1 +0.5 -0.3
nitrogen source Ammonium chloride (N) -0.0 -0.2 +0.0 +0.7 -0.1
stress Rifampicin 0.005 mg/ml -0.0 -0.2 +0.0 +0.6 +0.1
carbon source L-Isoleucine (C) -0.1 +0.4 -0.0 +0.1 +0.3
stress acetate 17 mM +0.1 -0.1 +0.1 +0.5 +0.1
pH Minimal media pH9 +0.0 +0.3 +0.1 +0.4 -0.1
carbon source L-Citrulline +0.1 +0.2 -0.1 +0.6 -0.1
stress Lomefloxacin 0.001 mM -0.0 -0.2 +0.0 +0.8 +0.1
carbon source L-Ornithine +0.1 -0.3 +0.1 +0.7 +0.2
anaerobic N1B4wt with N2E3m denitrifying replicate C +0.1 +0.2 +0.0 +0.5 -0.1
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.0 -0.0 +0.1 +0.6 +0.3
stress Gentamicin 0.006 mg/ml +0.1 +0.1 -0.0 +0.6 +0.1
carbon source L-Citrulline +0.1 +0.1 -0.0 +0.5 +0.2
lb LB +0.1 +0.1 +0.1 +0.7 -0.1
motility outer cut, LB soft agar motility assay +0.2 +0.4 -0.1 +0.5 -0.0
stress Cisplatin 0.006 mg/ml +0.2 +0.1 +0.3 +0.6 -0.0
stress Thallium(I) acetate 0.016 mg/ml +0.1 +0.2 +0.1 +0.8 -0.0
stress Sisomicin 0.008 mg/ml -0.0 +0.6 -0.1 +0.5 +0.3
stress Cisplatin 0.006 mg/ml +0.2 -0.0 +0.4 +0.6 +0.2
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