Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_04590 and AO353_04595 overlap by 11 nucleotidesAO353_04595 and AO353_04600 are separated by 450 nucleotidesAO353_04600 and AO353_04605 are separated by 10 nucleotidesAO353_04605 and AO353_04610 are separated by 10 nucleotides AO353_04590: AO353_04590 - MFS transporter, at 990,336 to 991,652 _04590 AO353_04595: AO353_04595 - GntR family transcriptional regulator, at 991,642 to 992,301 _04595 AO353_04600: AO353_04600 - glutamine ABC transporter ATP-binding protein, at 992,752 to 993,516 _04600 AO353_04605: AO353_04605 - amino acid ABC transporter permease, at 993,527 to 994,624 _04605 AO353_04610: AO353_04610 - amino acid ABC transporter permease, at 994,635 to 995,816 _04610
Group Condition AO353_04590 AO353_04595 AO353_04600 AO353_04605 AO353_04610
nitrogen source D-Alanine (N) +0.2 -0.2 -1.3 -0.9 -1.0
nitrogen source Gly-Glu (N) -0.0 +0.1 -1.3 -0.6 -0.9
carbon source L-Isoleucine (C) +0.3 -0.2 -0.6 -0.8 -0.2
carbon source L-Asparagine (C) +0.0 -0.1 -0.7 -0.3 -0.5
carbon source L-Leucine (C) +0.1 +0.2 -0.8 -0.3 -0.5
carbon source L-Asparagine (C) +0.0 +0.1 -0.3 -0.6 -0.5
carbon source L-Citrulline -0.3 -0.1 -0.4 -0.1 -0.0
nitrogen source Gly-DL-Asp (N) -0.1 +0.1 -0.5 -0.2 -0.1
stress Lomefloxacin 0.001 mM -0.4 -0.4 +0.2 -0.3 -0.1
carbon source L-Aspartic Acid (C) +0.2 -0.3 -0.3 -0.2 -0.1
carbon source L-Ornithine -0.0 -0.5 -0.6 -0.2 +0.7
stress Cobalt chloride 0.16 mM +0.1 -0.2 -0.4 -0.2 +0.0
carbon source L-Glutamine (C) +0.0 +0.2 -0.3 -0.2 -0.2
carbon source D-Glucose +0.1 -0.2 -0.3 -0.3 +0.1
carbon source L-Serine (C) +0.2 -0.2 -0.3 -0.3 +0.1
carbon source L-Proline (C) +0.3 +0.1 -0.1 -0.4 -0.2
pH Minimal media pH9 -0.1 -0.5 +0.3 +0.2 -0.2
stress Spectinomycin 0.2 mg/ml -0.2 +0.1 +0.2 -0.3 -0.1
carbon source L-Citrulline -0.1 +0.2 -0.2 +0.2 -0.2
carbon source L-Valine (C) -0.3 +0.1 -0.5 +0.4 +0.2
anaerobic Anaerobic, acetate donor; nitrate and iron -0.2 -0.0 +0.2 +0.4 -0.3
stress methylglyoxal 0.009 vol% +0.2 +0.3 -0.5 +0.1 -0.1
survival 4C survival; 192 hrs +0.1 +0.3 +0.4 -0.2 -0.0
carbon source L-Ornithine +0.0 +0.3 -0.3 +0.1 +0.4
stress Cisplatin 0.006 mg/ml -0.3 -0.1 +0.4 +0.5 +0.2
stress Benzalkonium Chloride 0.012 mg/ml +0.3 -0.4 +0.3 +0.2 +0.1
denitrifying Nitrate reduction, replicate C +0.0 -0.2 +0.1 +0.6 +0.1
carbon source L-Ornithine +0.1 -0.2 +0.3 +0.2 +0.3
carbon source propionate (C) +0.0 +0.1 +0.5 +0.3 +0.2
stress Cisplatin 0.006 mg/ml +0.2 +0.3 +0.9 -0.1 -0.1
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