Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_04570 and AO353_04575 are separated by 162 nucleotidesAO353_04575 and AO353_04580 are separated by 87 nucleotidesAO353_04580 and AO353_04585 are separated by 39 nucleotidesAO353_04585 and AO353_04590 are separated by 113 nucleotides AO353_04570: AO353_04570 - glutaredoxin, at 987,856 to 988,206 _04570 AO353_04575: AO353_04575 - glutathione S-transferase, at 988,369 to 989,304 _04575 AO353_04580: AO353_04580 - GIY-YIG nuclease, at 989,392 to 989,712 _04580 AO353_04585: AO353_04585 - ketosteroid isomerase, at 989,752 to 990,222 _04585 AO353_04590: AO353_04590 - MFS transporter, at 990,336 to 991,652 _04590
Group Condition AO353_04570 AO353_04575 AO353_04580 AO353_04585 AO353_04590
stress Cisplatin 0.006 mg/ml -0.1 -0.3 -0.8 -0.7 -0.3
stress Tetracycline 0.0016 mg/ml -0.2 -0.4 -1.0 -0.4 -0.1
motility outer cut, LB soft agar motility assay -0.4 +0.0 -0.0 -1.0 -0.1
carbon source L-Citrulline -0.4 -0.4 +0.3 -0.6 -0.3
pH Minimal media pH9 -1.0 -0.0 -0.4 +0.3 -0.2
carbon source L-Ornithine +0.4 -0.3 -0.9 -0.7 +0.0
carbon source L-Ornithine +0.3 -0.4 -1.1 -0.3 +0.1
stress Thallium(I) acetate 0.008 mg/ml +0.1 -0.4 -0.5 -0.3 +0.0
carbon source L-Ornithine -0.8 -0.2 +0.0 -0.2 +0.3
stress Benzethonium chloride 0.025 mM +0.2 -0.2 -0.5 -0.5 +0.1
stress Cisplatin 0.006 mg/ml -0.5 -0.5 +0.2 -0.2 +0.2
carbon source L-Citrulline -0.2 -0.4 -0.3 +0.6 -0.1
stress Sisomicin 0.008 mg/ml +0.4 -0.5 +0.2 -0.3 -0.1
denitrifying Nitrate reduction, replicate B -0.6 +0.1 +0.4 -0.3 +0.1
carbon source D-Glucose -0.0 -0.4 -0.4 +0.3 +0.3
stress Lomefloxacin 0.001 mM -0.1 -0.5 +0.7 +0.1 -0.4
pH Minimal media pH9 -0.7 +0.1 +0.4 +0.2 -0.1
carbon source acetate (C) +0.2 -0.5 +0.6 -0.2 -0.1
stress Cholin acetate 10 mM +0.2 -0.3 +0.5 -0.2 -0.1
anaerobic Anaerobic, acetate donor; nitrate and iron +0.0 -0.1 +0.8 -0.2 -0.2
carbon source L-Isoleucine (C) +0.1 -0.1 +0.6 -0.4 +0.3
carbon source propionate (C) +0.7 +0.1 -0.6 +0.3 +0.0
stress Rifampicin 0.005 mg/ml +0.2 -0.2 +0.3 +0.4 -0.2
motility outer cut, LB soft agar motility assay -0.2 -0.1 +0.6 +0.6 -0.3
carbon source pyruvate (C) +0.6 -0.3 +0.3 +0.0 +0.1
lb LB +0.3 -0.3 +0.9 -0.1 +0.3
survival 4C survival; 672 hrs +0.7 +0.1 -0.1 +0.6 +0.0
carbon source L-Citrulline +0.5 -0.1 +0.2 +0.2 +0.4
stress Thallium(I) acetate 0.008 mg/ml +0.4 -0.2 +0.9 +0.2 +0.2
nitrogen source Inosine (N) +0.3 +0.2 +0.8 +0.1 +0.2
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