Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 216 experiments or choose conditions or try the comparative fitness browser

500 ntAO353_04455 and AO353_04460 are separated by 24 nucleotidesAO353_04460 and AO353_04465 are separated by 28 nucleotidesAO353_04465 and AO353_04470 are separated by 240 nucleotidesAO353_04470 and AO353_04475 are separated by 190 nucleotides AO353_04455: AO353_04455 - Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data), at 957,107 to 958,117 _04455 AO353_04460: AO353_04460 - N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) (from data), at 958,142 to 960,658 _04460 AO353_04465: AO353_04465 - N-acetylglucosamine-specific PTS system, IIBC components (nagE) (from data), at 960,687 to 962,402 _04465 AO353_04470: AO353_04470 - hypothetical protein, at 962,643 to 962,942 _04470 AO353_04475: AO353_04475 - hypothetical protein, at 963,133 to 963,522 _04475
Group Condition AO353_04455 AO353_04460 AO353_04465 AO353_04470 AO353_04475
nitrogen source NAG (N) -3.7 -3.1 -2.6 -0.2 +0.5
carbon source D-Glucosamine Hydrochloride (C) -3.7 -0.0 +0.1 +0.2 +0.3
pH Minimal media pH9 -0.9 -0.3 -0.0 -0.4 -0.5
motility outer cut, LB soft agar motility assay -0.1 -0.1 +0.1 -0.0 -1.4
nitrogen source L-Histidine (N) -0.3 -0.4 -0.2 -0.0 -0.4
carbon source L-Phenylalanine (C) -0.8 -0.0 +0.2 -0.0 -0.7
stress Lomefloxacin 0.001 mM +0.2 -0.6 +0.2 +0.3 -1.3
motility outer cut, LB soft agar motility assay -0.2 -0.4 +0.2 +0.1 -0.9
stress Doxycycline hyclate 0.0006 mg/ml -0.8 -0.1 -0.1 -0.2 +0.0
carbon source L-Malic (C) -0.2 -0.1 +0.0 +0.1 -1.0
nitrogen source D-Glucosamine Hydrochloride (N) -1.7 +0.3 +0.0 +0.1 +0.3
carbon source D-Trehalose (C) -0.2 +0.1 -0.0 -0.0 -0.9
nitrogen source L-Lysine (N) +0.1 -0.1 -0.2 +0.2 -0.8
stress Cholin acetate 38 mM -0.1 +0.3 -0.2 +0.1 -0.8
carbon source L-Aspartic Acid (C) -0.2 -0.0 -0.0 +0.3 -0.7
stress Paraquat dichloride 0.032 mg/mL -0.1 +0.4 -0.1 +0.0 -1.0
carbon source L-Ornithine -0.3 -0.2 +0.2 +0.1 -0.4
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.0 +0.3 -0.0 -0.0 -0.8
carbon source L-Glutamic (C) -0.2 +0.4 -0.2 +0.1 -0.5
anaerobic Anaerobic, acetate donor; nitrate and iron -0.8 +0.2 -0.1 +0.5 -0.3
carbon source L-Histidine (C) -0.1 +0.4 -0.0 +0.0 -0.7
carbon source propionate (C) -0.2 +0.2 +0.3 +0.2 -0.3
carbon source acetate (C) +0.1 +0.3 +0.0 +0.4 -0.4
stress Cisplatin 0.006 mg/ml +0.1 -0.0 -0.4 -0.4 +1.1
carbon source L-Tryptophan (C) -0.0 +0.1 +0.3 -0.3 +0.8
carbon source Uridine (C) +0.2 -0.0 +0.2 +0.2 +0.7
carbon source L-Citrulline +0.1 +0.2 +0.2 -0.1 +0.9
carbon source L-Citrulline -0.0 +0.4 +0.1 +0.1 +1.0
carbon source L-Ornithine +0.4 +0.3 +0.1 -0.1 +0.9
survival 4C survival; 672 hrs +0.4 +1.3 +1.4 -0.1 -1.0
remove
AO353_04455
plot
remove
AO353_04460
plot
remove
AO353_04465
remove
AO353_04470
plot
remove
AO353_04475
plot