Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_04000 and AO353_04005 are separated by 100 nucleotidesAO353_04005 and AO353_04010 are separated by 2 nucleotidesAO353_04010 and AO353_04015 are separated by 125 nucleotidesAO353_04015 and AO353_04020 overlap by 11 nucleotides AO353_04000: AO353_04000 - acriflavine resistance protein B, at 859,573 to 862,599 _04000 AO353_04005: AO353_04005 - hypothetical protein, at 862,700 to 862,930 _04005 AO353_04010: AO353_04010 - InaA protein, at 862,933 to 863,646 _04010 AO353_04015: AO353_04015 - histidine kinase, at 863,772 to 865,052 _04015 AO353_04020: AO353_04020 - XRE family transcriptional regulator, at 865,042 to 865,725 _04020
Group Condition AO353_04000 AO353_04005 AO353_04010 AO353_04015 AO353_04020
stress Polymyxin B sulfate 4 mg/ml -0.1 +0.1 -0.1 -0.7 -2.8
carbon source L-Ornithine -0.1 -0.6 -0.3 -0.5 -0.2
stress Benzalkonium Chloride 0.01 mg/ml +0.1 -0.9 -0.3 -0.5 -0.0
carbon source L-Leucine (C) -0.1 -1.0 +0.2 -0.5 -0.0
motility outer cut, LB soft agar motility assay -0.1 -1.1 -0.4 -0.2 +0.2
carbon source L-Citrulline -0.1 -0.7 +0.2 -0.9 +0.1
motility outer cut, LB soft agar motility assay +0.1 -0.1 -0.0 +0.0 -1.2
carbon source L-Serine (C) -0.1 -0.8 -0.1 -0.2 +0.2
carbon source L-Ornithine -0.1 +0.3 -0.1 -0.9 -0.2
stress methylglyoxal 0.009 vol% +0.0 -0.5 +0.1 -0.7 +0.2
carbon source L-Citrulline -0.1 -0.8 +0.3 -0.5 +0.2
carbon source L-Ornithine -0.1 -0.5 +0.3 -0.5 -0.1
carbon source Trisodium citrate (C) +0.1 -0.2 +0.0 -1.1 +0.2
carbon source propionate (C) +0.2 -0.3 -0.2 -0.7 +0.3
carbon source L-Citrulline +0.1 +0.2 +0.1 -0.8 -0.3
carbon source Trisodium citrate (C) -0.0 +0.1 +0.1 -1.1 +0.3
pH Minimal media pH9 +0.1 +0.3 -0.0 -1.1 +0.2
carbon source D-Glucose -0.2 +0.7 +0.3 -0.7 -0.5
stress Cisplatin 0.006 mg/ml +0.3 -0.1 -0.4 +0.3 -0.4
stress Lomefloxacin 0.001 mM +0.1 +0.5 -0.2 -0.7 +0.2
carbon source acetate (C) +0.2 -0.1 +0.4 -0.6 +0.1
stress perchlorate 75 mM -0.0 -0.1 -0.1 +0.8 -0.5
stress Doxycycline hyclate 0.0006 mg/ml -0.2 -0.2 +0.7 -0.8 +0.7
carbon source L-Valine (C) -0.0 +0.6 -0.3 -0.5 +0.4
carbon source D-Serine (C) -0.0 +0.7 -0.1 -0.5 +0.3
stress Cisplatin 0.006 mg/ml -0.0 -0.4 +0.5 +0.7 +0.3
stress Gentamicin 0.006 mg/ml +0.1 +0.4 +0.0 +0.8 -0.2
stress Spectinomycin 0.2 mg/ml -0.1 +0.3 -0.0 +0.7 +0.3
anaerobic Anaerobic, acetate donor; nitrate and iron -0.0 +1.1 +0.2 +0.5 +0.4
stress Sisomicin 0.008 mg/ml +0.1 +0.2 -0.1 +3.6 -0.4
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