Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_03790 and AO353_03795 are separated by 491 nucleotidesAO353_03795 and AO353_03800 are separated by 156 nucleotidesAO353_03800 and AO353_03805 overlap by 7 nucleotidesAO353_03805 and AO353_03810 are separated by 206 nucleotides AO353_03790: AO353_03790 - hypothetical protein, at 808,932 to 810,038 _03790 AO353_03795: AO353_03795 - fumarate hydratase, at 810,530 to 812,053 _03795 AO353_03800: AO353_03800 - cytochrome C biogenesis protein CcmE, at 812,210 to 813,976 _03800 AO353_03805: AO353_03805 - C4-dicarboxylate ABC transporter, at 813,970 to 815,295 _03805 AO353_03810: AO353_03810 - Alpha-ketoglutarate permease, MFS superfamily (from data), at 815,502 to 816,821 _03810
Group Condition AO353_03790 AO353_03795 AO353_03800 AO353_03805 AO353_03810
carbon source a-Ketoglutaric (C) -0.0 -1.7 -3.4 -3.1 -4.3
carbon source a-Ketoglutaric (C) +0.7 -2.4 -3.2 -3.1 -3.9
carbon source L-Citrulline (C) +0.2 -3.0 +0.0 -0.4 -0.0
carbon source L-Glutamic (C) +0.1 -3.4 +0.1 -0.0 +0.1
stress acetate 34 mM -0.3 -2.7 -0.1 -0.1 +0.1
nitrogen source L-Citrulline (N) +0.2 -2.9 -0.0 -0.4 -0.1
stress Tetracycline 0.0016 mg/ml -0.1 -2.3 +0.1 -0.8 +0.0
carbon source Fumarate (C) +0.1 -3.3 +0.0 +0.0 +0.0
carbon source succinate (C) +0.1 -2.1 -0.3 -0.3 -0.3
stress 1-ethyl-3-methylimidazolium chloride 170 mM +0.1 -2.4 +0.0 -0.7 +0.0
stress acetate 68 mM +0.2 -2.5 -0.0 -0.5 -0.1
carbon source casaminos (C) +0.0 -2.9 -0.1 +0.0 +0.1
stress benzoic 0.58 mg/ml +0.1 -2.7 +0.2 -0.4 -0.0
nitrogen source L-Glutamine (N) +0.1 -2.4 +0.1 -0.5 -0.1
stress copper (II) chloride 2.5 mM +0.1 -1.8 -0.0 -0.9 +0.0
carbon source L-Histidine (C) +0.0 -2.6 -0.1 +0.1 +0.0
motility outer cut, LB soft agar motility assay +1.2 -2.8 -0.0 -1.0 +0.3
carbon source L-Glutamine (C) +0.1 -2.6 +0.0 -0.1 +0.2
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.2 -2.4 +0.1 +0.2 -0.1
carbon source L-Histidine (C) -0.0 -2.4 -0.1 +0.2 +0.2
carbon source acetate (C) -0.4 -2.3 +0.5 -0.1 +0.2
stress Cholin acetate 38 mM -0.2 -2.2 +0.2 +0.4 +0.1
nitrogen source L-Serine (N) +0.1 -2.3 +0.0 +0.6 +0.1
motility outer cut, LB soft agar motility assay +1.1 -0.7 -0.5 +0.6 +0.2
stress Cisplatin 0.006 mg/ml -0.3 +1.9 -0.1 -0.6 +0.3
stress Cisplatin 0.006 mg/ml -0.4 +2.0 +0.3 -0.5 +0.2
stress Fusidic 0.125 mg/ml -0.0 +3.4 -0.3 -1.4 -0.0
denitrifying Nitrate reduction, replicate B -0.2 +1.9 +0.1 +0.5 -0.1
stress nitrate 200 mM +0.3 +3.3 -0.2 -0.2 -0.1
stress perchlorate 75 mM +0.1 +4.3 -0.4 -0.2 -0.0
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