Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_03565 and AO353_03570 are separated by 14 nucleotidesAO353_03570 and AO353_03575 overlap by 11 nucleotidesAO353_03575 and AO353_03580 are separated by 139 nucleotidesAO353_03580 and AO353_03585 are separated by 0 nucleotides AO353_03565: AO353_03565 - protein TolR, at 763,104 to 763,565 _03565 AO353_03570: AO353_03570 - protein TolQ, at 763,580 to 764,275 _03570 AO353_03575: AO353_03575 - 4-hydroxybenzoyl-CoA thioesterase, at 764,265 to 764,732 _03575 AO353_03580: AO353_03580 - ATP-dependent DNA helicase RuvB, at 764,872 to 765,933 _03580 AO353_03585: AO353_03585 - ATP-dependent DNA helicase RuvA, at 765,934 to 766,542 _03585
Group Condition AO353_03565 AO353_03570 AO353_03575 AO353_03580 AO353_03585
motility outer cut, LB soft agar motility assay N.D. N.D. -0.6 -2.9 -2.8
stress Lomefloxacin 0.001 mM N.D. N.D. -0.6 -2.8 -2.7
stress methylglyoxal 0.008 vol% N.D. N.D. -0.1 -3.2 -2.7
pH Minimal media pH9 N.D. N.D. -0.1 -3.2 -2.5
stress Cobalt chloride 0.32 mM N.D. N.D. -0.4 -3.0 -2.3
pH Minimal media pH9 N.D. N.D. -0.3 -3.4 -1.9
carbon source Carnitine Hydrochloride (C) N.D. N.D. -0.2 -3.1 -2.1
stress methylglyoxal 0.009 vol% N.D. N.D. +0.1 -2.7 -2.7
carbon source L-Arginine (C) N.D. N.D. -0.0 -1.7 -3.5
carbon source D-Alanine (C) N.D. N.D. -0.2 -2.5 -2.5
stress Spectinomycin 0.2 mg/ml N.D. N.D. -0.2 -1.5 -3.4
motility outer cut, LB soft agar motility assay N.D. N.D. -0.7 -2.9 -1.5
carbon source D-Ribose (C) N.D. N.D. -0.2 -2.4 -2.4
stress A22 0.01 mg/ml N.D. N.D. +0.1 -1.8 -3.4
stress Nickel (II) chloride 0.625 mM N.D. N.D. -0.1 -1.9 -3.0
stress Nalidixic 0.004 mg/ml N.D. N.D. -0.1 -2.7 -2.2
carbon source L-Ornithine N.D. N.D. -0.1 -1.2 -3.7
nitrogen source Urea (N) N.D. N.D. -0.1 -3.2 -1.6
survival 4C survival; 360 hrs N.D. N.D. -0.4 -2.0 -2.5
stress Vancomycin 1 mg/ml N.D. N.D. -0.2 -3.0 -1.7
stress Benzethonium chloride 0.025 mM N.D. N.D. -0.5 -3.0 -1.3
carbon source Tween 20 (C) N.D. N.D. +0.1 -3.0 -1.9
carbon source D-Ribose (C) N.D. N.D. -0.2 -2.6 -1.9
carbon source D-Lactate (C) N.D. N.D. -0.3 -2.4 -2.0
stress Paraquat dichloride 0.032 mg/mL N.D. N.D. +0.0 -1.9 -2.8
carbon source propionate (C) N.D. N.D. -0.5 -1.7 -2.5
stress Polymyxin B sulfate 4 mg/ml N.D. N.D. -0.2 -2.1 -2.3
stress 1-ethyl-3-methylimidazolium lysine 10.5 mM N.D. N.D. +0.1 -3.1 -1.5
stress Benzalkonium Chloride 0.012 mg/ml N.D. N.D. +0.3 -2.5 -2.0
carbon source acetate (C) N.D. N.D. +0.4 -1.8 -2.5
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