Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E3
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 216 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
AO353_03105 and AO353_03110 are separated by 83 nucleotides
AO353_03110 and AO353_03115 are separated by 202 nucleotides
AO353_03115 and AO353_03120 are separated by 163 nucleotides
AO353_03120 and AO353_03125 overlap by 16 nucleotides
AO353_03105: AO353_03105 - XRE family transcriptional regulator, at 665,714 to 666,034
_03105
AO353_03110: AO353_03110 - hydrolase, at 666,118 to 667,173
_03110
AO353_03115: AO353_03115 - TetR family transcriptional regulator, at 667,376 to 667,990
_03115
AO353_03120: AO353_03120 - hypothetical protein, at 668,154 to 668,693
_03120
AO353_03125: AO353_03125 - LysR family transcriptional regulator, at 668,678 to 669,577
_03125
Group
Condition
AO353
_03105
AO353
_03110
AO353
_03115
AO353
_03120
AO353
_03125
carbon source
L-Citrulline
+0.1
-1.2
-0.2
-0.2
-0.3
carbon source
L-Aspartic Acid (C)
-0.5
-0.4
+0.1
-0.8
+0.3
carbon source
L-Arginine (C)
+0.1
+0.4
-0.8
-0.4
-0.3
stress
methylglyoxal 0.009 vol%
+0.3
-1.3
+0.2
+0.2
-0.3
carbon source
L-Citrulline
-0.4
-0.5
+0.2
+0.4
-0.6
motility
outer cut, LB soft agar motility assay
-0.3
-0.4
-0.3
-0.3
+0.5
stress
Benzalkonium Chloride 0.012 mg/ml
-0.0
-0.7
+0.4
-0.4
+0.1
motility
outer cut, LB soft agar motility assay
+0.6
-0.8
-0.9
+0.0
+0.4
carbon source
L-Ornithine
-0.1
-0.5
+0.4
-0.6
+0.4
stress
Benzethonium chloride 0.025 mM
-0.4
-0.7
+0.7
+0.1
-0.1
carbon source
L-Asparagine (C)
-0.2
+0.5
-0.9
+0.0
+0.1
carbon source
L-Leucine (C)
-0.4
-0.5
+0.6
+0.1
-0.1
stress
Spectinomycin 0.1 mg/ml
+0.0
+0.2
+0.6
-0.9
+0.1
stress
Gentamicin 0.006 mg/ml
-0.3
-0.1
+0.4
-0.4
+0.5
carbon source
L-Valine (C)
+0.1
+0.7
-0.6
-0.1
+0.2
pH
Minimal media pH8
+0.2
+0.3
-0.7
+0.6
-0.1
carbon source
L-Alanine (C)
-0.2
+0.7
-0.3
-0.1
+0.4
pH
Minimal media pH9
-0.1
+0.4
-0.8
+0.4
+0.6
stress
Spectinomycin 0.2 mg/ml
-0.2
+0.2
+0.6
-0.3
+0.3
survival
4C survival; 360 hrs
-0.2
+0.0
+1.2
-0.2
-0.1
stress
Sisomicin 0.008 mg/ml
-0.0
-0.4
+0.8
-0.0
+0.4
stress
Cisplatin 0.006 mg/ml
-1.0
-0.2
+0.1
+1.1
+0.8
stress
Fusidic 0.125 mg/ml
-0.2
-0.3
+2.0
+0.1
+0.1
denitrifying
Nitrate reduction, replicate C
+0.1
+0.2
+0.9
+0.4
+0.1
stress
Chloramphenicol 0.0025 mg/ml
-0.1
+0.2
+0.9
+0.3
+0.4
stress
Lomefloxacin 0.001 mM
+0.5
-0.8
+2.0
+0.4
+0.3
stress
Tetracycline 0.0016 mg/ml
-0.2
+0.2
+2.1
+0.2
+0.1
survival
4C survival; 672 hrs
+0.3
-0.4
+2.2
+0.6
-0.2
anaerobic
Anaerobic, acetate donor; nitrate and iron
+0.8
+0.6
+1.1
+0.0
+0.3
stress
Doxycycline hyclate 0.0006 mg/ml
+0.3
-0.7
+2.9
-0.3
+0.7
remove
AO353_03105
plot
remove
AO353_03110
plot
remove
AO353_03115
remove
AO353_03120
plot
remove
AO353_03125
plot